qiime2 q2-longitudinal issues

qiime2 / q2-longitudinal

QIIME 2 plugin for paired sample comparisons

BSD 3-Clause "New" or "Revised" License

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issues

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TEST: more robust testing for volatility plot

#187 Oddant1 closed 2 months ago
2
MAINT: changes to address test failures from python 3.9 update

#186 lizgehret closed 6 months ago
0
Test to check within-group similarity

#185 jwdebelius opened 9 months ago
1
Expand LME model to allow additional mixed effects

#184 jwdebelius opened 9 months ago
1
CI: Updates to ci-dev workflow

#183 hagenjp closed 1 year ago
0
[REL] CI: Set global pins on seaborn, matplotlib, and patsy

#182 ebolyen closed 1 year ago
0
CI: Set global pins on seaborn, matplotlib, and patsy

#181 ebolyen closed 1 year ago
1
CI: add additional tests in commands section

#179 Oddant1 closed 1 year ago
0
BUG: fix handling of NaNs in volatility plot

#178 lizgehret closed 1 year ago
2
ci: force re-render again

#177 lizgehret closed 1 year ago
0
ci: force re-render for skbio update

#176 lizgehret closed 1 year ago
0
Nan Handling in Feature-Volatility Plot Bug

#175 cherman2 closed 1 year ago
0
bug: `pairwise-distances` fails when samples without group are in metadata but not distance matrix

#174 lizgehret closed 2 years ago
6
dep: adding scipy pin

#173 lizgehret closed 2 years ago
0
`pairwise-distances` fails when samples without state, group, or individual are in metadata but not distance matrix

#172 gregcaporaso closed 2 years ago
2
dep: rebuild for skbio 0.5.7 and pandas >=1.2.5

#171 thermokarst closed 2 years ago
0
dep: pin skbio

#170 thermokarst closed 2 years ago
0
PERF: Speed up distance computations

#169 ElDeveloper opened 2 years ago
10
BUG/REF: use Q() for unusual columns in LME

#168 ebolyen closed 2 years ago
0
ci: update recipe

#167 thermokarst closed 3 years ago
0
ci: library integration

#166 thermokarst closed 3 years ago
0
maint: q2-sample-classifier split api updates

#165 thermokarst closed 3 years ago
2
Anova rm addition

#164 sterrettJD closed 11 months ago
14
Add Shapiro-Wilk test

#163 timyerg opened 3 years ago
0
new: python 3.8

#162 thermokarst closed 3 years ago
0
bug: close figs _all_ the time

#161 thermokarst closed 3 years ago
0
add compositionally aware paired test

#160 nbokulich opened 3 years ago
0
Fixed "truncate=False" parameter

#159 timyerg closed 4 years ago
0
HACK: Pin mpl and mpl base to 322

#158 Oddant1 closed 4 years ago
0
MAINT: updates for scipy 1.5

#157 thermokarst closed 4 years ago
3
linear-mixed-effects: upgrade diagnostic plots

#156 nbokulich opened 4 years ago
0
Upgrade Volatility Charts to Vega 5

#155 Oddant1 opened 4 years ago
0
HACK: Remove "Open in Vega Editor" from volatility for now

#154 Oddant1 closed 4 years ago
9
Volatility Visualizations not Appearing Correctly in Vega Editor

#153 Oddant1 opened 4 years ago
0
Minor docstring corrections

#152 andrewsanchez closed 4 years ago
1
`anova` should report omnibus test results

#151 gregcaporaso opened 4 years ago
0
fix pairwise-difference no variance

#149 nbokulich closed 4 years ago
2
pairwise-differences: t-value referenced before assignment

#148 nbokulich closed 4 years ago
0
ENH: q2-volatility: set axis limits interactively

#147 nbokulich opened 5 years ago
0
adding importance filtering to feature_volatility

#146 nbokulich closed 5 years ago
0
added cividis colormap

#145 nbokulich closed 5 years ago
0
ENH: `feature-volatility` should only plot the top N features

#144 nbokulich closed 5 years ago
0
update test data for multiple random effects in sms 0.10.0

#143 nbokulich closed 5 years ago
0
fixed broken dois

#142 nbokulich closed 5 years ago
3
MAINT: removes duplicate "each" from plot-feature-volatility docs

#141 ChrisKeefe closed 5 years ago
0
ENH: added feature count limit for maturity heatmaps

#140 nbokulich closed 5 years ago
0
MAINT: Travis, bump to python 3.6

#139 thermokarst closed 5 years ago
0
add visualizer to make boxplots

#138 nbokulich opened 5 years ago
0
MAINT: Updates for python 3.6

#137 thermokarst closed 5 years ago
0