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qiime2
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q2galaxy
Generate Galaxy tool descriptions automatically from QIIME 2 actions.
BSD 3-Clause "New" or "Revised" License
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Ensure that hidden actions are rendered in q2galaxy
#57
ebolyen
opened
3 months ago
1
Ensure that
#56
ebolyen
closed
3 months ago
0
Add xrefs with bio.tools to XMLs
#54
bebatut
closed
3 months ago
1
Running on Apple Silicon M1
#53
nikothomas
closed
4 months ago
1
No tools:unzip_collection, Flatten collection and Sort
#52
Dong2843997826
opened
5 months ago
6
qiime deblur denoise-16S/denoise-other not working on usegalaxy.eu
#51
Oddant1
opened
7 months ago
2
Make the galaxy dev's solution work in q2galaxy itself
#50
Oddant1
closed
8 months ago
1
Add tool specifically for importing fastq data both paired and unpaired
#49
Oddant1
closed
7 months ago
0
Galaxy cleanup
#48
Oddant1
closed
7 months ago
20
MAINT: filter jobs and threads primitives from xml
#47
colinvwood
closed
7 months ago
1
qiime2_core__tools__import stacktrace from usegalaxy.eu
#46
bgruening
closed
7 months ago
21
Extra text in tool version
#55
bernt-matthias
opened
11 months ago
2
CI:Updates to ci-dev workflow
#45
hagenjp
closed
11 months ago
0
ci: add additional tests in commands section
#44
lizgehret
closed
1 year ago
0
NEW: adds ResultCollections to q2galaxy
#43
lizgehret
closed
1 year ago
0
BUG: semantic types with brackets are now escaped in assertions
#42
ebolyen
closed
2 years ago
0
Leftover notes, will be outdated soon
#41
ebolyen
closed
2 years ago
1
WIP: Improving planemo lint situation and some other updates
#40
ebolyen
closed
2 years ago
1
Some small things to improve
#39
bgruening
opened
2 years ago
2
Use DOI citation type when possible
#38
ebolyen
closed
2 years ago
0
ToolShed deposit
#37
abretaud
closed
2 years ago
4
Consider using docker-compose for stand-alone deployments
#36
colinbrislawn
opened
2 years ago
4
BUG: prevent sanitization of Str, mostly
#35
ebolyen
closed
2 years ago
0
IMP: use kebab case and fix trailing period from fmt
#34
ebolyen
closed
2 years ago
0
NEW: adds q2galaxy template tool-conf
#33
ebolyen
closed
2 years ago
0
NEW: adds more Metadata & RST UsageDriver/helptext
#32
ebolyen
closed
2 years ago
0
MAINT: new Usage API
#31
ebolyen
closed
2 years ago
0
MAINT: update to usagev2 and typemap fix
#30
ebolyen
closed
2 years ago
0
ci: library integration
#29
thermokarst
closed
3 years ago
0
Template filter
#28
Oddant1
closed
2 years ago
4
NEW: importing
#27
ebolyen
closed
3 years ago
5
DOC: add documentation
#26
ebolyen
closed
3 years ago
0
Simple collections
#25
ebolyen
closed
3 years ago
0
CI: uninstall q2galaxy before dev install
#24
ebolyen
closed
3 years ago
0
BLD: set zip_safe
#23
ebolyen
closed
3 years ago
1
BLD: create basic docker build
#22
ebolyen
closed
3 years ago
0
DEP: update to python 3.8
#21
ebolyen
closed
3 years ago
0
NEW: simple metadata handling
#20
ebolyen
closed
3 years ago
0
MAINT: update CI for mystery-stew location
#19
ebolyen
closed
3 years ago
0
Handling collections
#18
Oddant1
closed
3 years ago
1
imp: unified library urls
#17
thermokarst
closed
3 years ago
2
BLD: conda package and galaxy-side install
#16
ebolyen
closed
3 years ago
0
BLD: set up conda packaging
#15
ebolyen
closed
3 years ago
1
REF: robust parameter management
#14
ebolyen
closed
3 years ago
2
REF: new export and package structure
#13
ebolyen
closed
3 years ago
0
MISC: errors, predicates, docs, output-structure
#12
ebolyen
closed
3 years ago
1
TST: create initial test loop via q2-mystery-stew
#11
ebolyen
closed
3 years ago
1
(DRAFT) NEW: Parameter support for q2galaxy
#10
Oddant1
closed
3 years ago
16
WIP: initial package structure
#9
ebolyen
closed
5 years ago
0
flake8 compliance edits
#8
ChrisKeefe
closed
5 years ago
0
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