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qmarcou / IGoR

IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:
https://qmarcou.github.io/IGoR/
GNU General Public License v3.0
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Compilation Issue with igor.1 missing #10

Closed NickEngland closed 6 years ago

NickEngland commented 6 years ago

When running make:

make[2]: *** No rule to make target igor.1', needed byall-am'. Stop.

When the autogen.sh runs, I get the following:

pandoc -s -f markdown -t man README.md -o igor.1 pandoc: README.md: openFile: does not exist (No such file or directory)

Doing: asciidoc -b docbook README.adoc pandoc -f docbook -t markdown_strict README.xml -o README.md (from https://tinyapps.org/blog/nix/201701240700_convert_asciidoc_to_markdown.html)

Seems to resolve the issue.

Perhaps these steps should be added to the autogen.sh? Or am I missing some dependency?

qmarcou commented 6 years ago

Hi! Thank you for pointing this out, I actually thought I had fixed this before releasing v 1.2.0 but I remember that I actually made a hardfix and forgot to add this in my to do list...

Thanks for submiting a pull request I'll answer you in more depth there!

qmarcou commented 6 years ago

Hi! Again thank you for pointing this out, the issue is now fixed on the dev branch and will be up in the new version.