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qmarcou / IGoR

IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:
https://qmarcou.github.io/IGoR/
GNU General Public License v3.0
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File not found when IGoR is installed locally #47

Closed jdgagnon closed 5 years ago

jdgagnon commented 5 years ago

Hello, I am getting the following error:

[IGoR] ERROR: Exception caught while reading TRA V genomic templates.
[IGoR] ERROR: File not found: /usr/local/share/igor/models/human/tcr_alpha/ref_genome/genomicVs.fasta
[IGoR] ERROR: Use "man igor", "igor -help" or visit https://github.com/qmarcou/IGoR to see available commands and their effects

It appears to be related to installing igor locally since these files do exist but they are located at: ~/share/igor/models/human/tcr_alpha/ref_genome/genomicVs.fasta

Thanks for your help!

jdgagnon commented 5 years ago

running make uninstall and deleting all files and then repeating the installation seems to have fixed the issue.