Using the --coverage output subarg

qmarcou / IGoR

IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:

https://qmarcou.github.io/IGoR/

GNU General Public License v3.0

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Using the --coverage output subarg #55

Open jeremycfd opened 4 years ago

jeremycfd commented 4 years ago

Hi,

I've been unable to use the --coverage subarg of output without generating an error:

terminate called after throwing an instance of 'std::logic_error'
  what():  basic_string::_M_construct null not valid
Aborted (core dumped)

I was wondering if you could provide an example use of this subarg and the resulting output? Thanks!

bigbeauty-hub commented 4 years ago

HI, I have got the same problems. Setting number of threads to: 5 TXT extension detected for the input sequence file Species parameter set to: human Chain parameter set to: beta Batch name set to: foo_ terminate called after throwing an instance of 'std::logic_error' what(): basic_string::_M_construct null not valid