qmarcou / IGoR

IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:
https://qmarcou.github.io/IGoR/
GNU General Public License v3.0
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Undefined reference error during compling #73

Closed colejensen closed 3 months ago

colejensen commented 3 months ago

Describe the bug During the make step, compiling fails. I get the following messages:

igor_1-4-0/igor_src/Deletion.cpp:293: undefined reference to comp_nt_int(int const&, int const&)' igor_1-4-0/igor_src/Deletion.cpp:794: undefined reference to comp_nt_int(int const&, int const&)' igor_1-4-0/igor_src/Deletion.cpp:531: undefined reference to comp_nt_int(int const&, int const&)'

followed by: collect2: error: ld returned 1 exit status make[2]: [Makefile:446: igor] Error 1 make: [Makefile:386: all] Error 2

I have attached the full log of both the ./configure step and the output of the make step.

Steps to reproduce the bug ./configure CC=gcc-7 CXX=g++-7 make

System information: