API Error: 404 - Not Found

[jj11031]

Sharing the terminal output here:

Microsoft Windows [Version 10.0.22631.3085] (c) Microsoft Corporation. All rights reserved.

D:\ElephantDataAnalysis\Metrics and RSF>quarto publish quarto-pub ? Publish update to: » https://jj11031.quarto.pub/spatiotemporal-movement-metrics-of-wild-elephants (Quarto Pub - jayjit11031@gmail.com) Rendering for publish:

processing file: Metrics-and-RSF.rmarkdown |. | 3% [Loading essential libraries]trying URL 'http://cran.rstudio.com/bin/windows/contrib/4.3/lattice_0.22-5.zip' Content type 'application/zip' length 1380440 bytes (1.3 MB)

downloaded 1.3 MB

output file: Metrics-and-RSF.knit.md

pandoc to: html output-file: Metrics and RSF.html standalone: true section-divs: true html-math-method: mathjax wrap: none default-image-extension: png toc: true

metadata document-css: false link-citations: true date-format: long lang: en bibliography:

• reference.bib title: Spatiotemporal movement metrics of wild elephants author: Jayjit Das

[WARNING] Citeproc: citation Benhamou2004 not found [>] Preparing to publish document ERROR: API Error: 404 - Not Found

Stack trace: at QuartoPubClient.createDeploy (file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:102930:23) at eventLoopTick (ext:core/01_core.js:183:11) at async file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:102043:22 at async withSpinner (file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:75270:16) at async handlePublish (file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:102021:5) at async publishDocument (file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:106587:38) at async publish6 (file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:106679:132) at async doPublish (file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:106639:13) at async publishAction (file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:106650:9) at async Command.fn (file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:106627:9)

D:\ElephantDataAnalysis\Metrics and RSF>quarto check Quarto 1.4.549 [>] Checking versions of quarto binary dependencies... Pandoc version 3.1.11: OK Dart Sass version 1.69.5: OK Deno version 1.37.2: OK [>] Checking versions of quarto dependencies......OK [>] Checking Quarto installation......OK Version: 1.4.549 Path: C:\Users\jayji\AppData\Local\Programs\Quarto\bin CodePage: 1252

[>] Checking tools....................OK TinyTeX: (external install) Chromium: (not installed)

[>] Checking LaTeX....................OK Using: TinyTex Path: C:\Users\jayji\AppData\Roaming\TinyTeX\bin\windows\ Version: 2023

[>] Checking basic markdown render....OK

[>] Checking Python 3 installation....OK Version: 3.9.18 (Conda) Path: C:/Users/jayji/AppData/Local/r-miniconda/envs/r-reticulate/python.exe Jupyter: (None)

  Jupyter is not available in this Python installation.
  Install with conda install jupyter

[>] Checking R installation...........OK Version: 4.3.0 Path: C:/PROGRA~1/R/R-43~1.0 LibPaths:

• C:/Users/jayji/AppData/Local/R/win-library/4.3
• C:/Program Files/R/R-4.3.0/library knitr: 1.45 rmarkdown: 2.25

[>] Checking Knitr engine render......OK

[mcanouil]

Could you properly format your post using code blocks and could you properly describe the issue your having? Unfortunately, currently your post is not legible. Thank you!

Also could you share a small self-contained "working" (reproducible) example to work with, i.e., a complete Quarto document or a Git repository? Thanks.

You can share a Quarto document using the following syntax, i.e., using more backticks than you have in your document (usually four ````).

````qmd
---
title: "Reproducible Quarto Document"
format: html
engine: knitr
---

This is a reproducible Quarto document using `format: html`.
It is written in Markdown and contains embedded R code.
When you run the code, it will produce a plot.

```{r}
plot(cars)

The end.

[jj11031]

---
title: "Spatiotemporal movement metrics"
author: Jayjit Das
format:
  html:
    toc: true
    warning: false
    freeze: true
bibliography: reference.bib
---

#### Goal: Exploratory data analysis 

In this project, we shall go through various movement metrics to understand spatio-temporal movement of animals. This entire exercise shall consist of data wrangling, analysis and visualizations.

We will derive step lengths (SL), turning angles (TA), net squared displacement (NSD) and explore them to try and make ecological sense of the data.

Step lengths, is the Euclidean distance between two consecutive tracked locations, and turning angles, the angle made by the animal’s turn during three consecutive tracked locations, describe distance and direction, respectively. By accounting for the temporal difference between tracked locations they can be used to evaluate an animal’s speed and tortuosity. Both of these metrics are widely used in movement ecology. @avgar2016a

![](images/Example-of-movement-pathway-in-SSFs-Example-of-how-a-movement-pathway-can-be-simplified.png){width="636"}

Figure above aids in visualizing the step length and turning angle concepts.

Later we will also derive daily movement metrics like Daily Distance Traveled (DDT), Daily Overall Displacement (DOD), Daily Maximum Displacement (DMD) and Straightness of Daily Path (SDP). We shall learn about them in details gradually. 

```{r}
  E$week <- as.numeric(strftime(as.POSIXlt(E$t_),format="%W"))
  E$year <- as.numeric(strftime(as.POSIXlt(E$t_),format="%Y"))
  E$day <- as.numeric(strftime(as.POSIXlt(E$t_),format="%j"))
  str(E)

html file is being rendered but when I am trying the publish it using (quarto publish quarto-pub) in terminal, the following output is generated with error for API. [>] Preparing to publish document
"ERROR: API Error: 404 - Not Found" 

Stack trace:
    at QuartoPubClient.createDeploy (file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:102930:23)
    at eventLoopTick (ext:core/01_core.js:183:11)
    at async file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:102043:22
    at async withSpinner (file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:75270:16)
    at async handlePublish (file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:102021:5)
    at async publishDocument (file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:106587:38)
    at async publish6 (file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:106679:132)
    at async doPublish (file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:106639:13)
    at async publishAction (file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:106650:9)
    at async Command.fn (file:///C:/Users/jayji/AppData/Local/Programs/Quarto/bin/quarto.js:106627:9)

I tried to check if everything is okay with "quarto check" as the output is as follows: D:\ElephantDataAnalysis\Metrics and RSF>quarto check
Quarto 1.4.549
[>] Checking versions of quarto binary dependencies...
      Pandoc version 3.1.11: OK
      Dart Sass version 1.69.5: OK
      Deno version 1.37.2: OK
[>] Checking versions of quarto dependencies......OK
[>] Checking Quarto installation......OK
      Version: 1.4.549
      Path: C:\Users\jayji\AppData\Local\Programs\Quarto\bin
      CodePage: 1252

[>] Checking tools....................OK
      TinyTeX: (external install)
      Chromium: (not installed)

[>] Checking LaTeX....................OK
      Using: TinyTex
      Path: C:\Users\jayji\AppData\Roaming\TinyTeX\bin\windows\
      Version: 2023

[>] Checking basic markdown render....OK

[>] Checking Python 3 installation....OK
      Version: 3.9.18 (Conda)
      Path: C:/Users/jayji/AppData/Local/r-miniconda/envs/r-reticulate/python.exe
      Jupyter: (None)

      Jupyter is not available in this Python installation.
      Install with conda install jupyter

[>] Checking R installation...........OK
      Version: 4.3.0
      Path: C:/PROGRA~1/R/R-43~1.0
      LibPaths:
        - C:/Users/jayji/AppData/Local/R/win-library/4.3
        - C:/Program Files/R/R-4.3.0/library
      knitr: 1.45
      rmarkdown: 2.25

[>] Checking Knitr engine render......OK

[mcanouil]

Please edit your posts and use code blocks to put terminal outputs separately from the text.

[jj11031]

qmd file inputs:

---
title: "Spatiotemporal movement metrics"
author: Jayjit Das
format:
  html:
    toc: true
    warning: false
    freeze: true
bibliography: reference.bib
---

#### Goal: Exploratory data analysis 

In this project, we shall go through various movement metrics to understand spatio-temporal movement of animals. This entire exercise shall consist of data wrangling, analysis and visualizations.

We will derive step lengths (SL), turning angles (TA), net squared displacement (NSD) and explore them to try and make ecological sense of the data.

Step lengths, is the Euclidean distance between two consecutive tracked locations, and turning angles, the angle made by the animal’s turn during three consecutive tracked locations, describe distance and direction, respectively. By accounting for the temporal difference between tracked locations they can be used to evaluate an animal’s speed and tortuosity. Both of these metrics are widely used in movement ecology. @avgar2016a

![](images/Example-of-movement-pathway-in-SSFs-Example-of-how-a-movement-pathway-can-be-simplified.png){width="636"}

Figure above aids in visualizing the step length and turning angle concepts.

Later we will also derive daily movement metrics like Daily Distance Traveled (DDT), Daily Overall Displacement (DOD), Daily Maximum Displacement (DMD) and Straightness of Daily Path (SDP). We shall learn about them in details gradually. 

```{r}
  E$week <- as.numeric(strftime(as.POSIXlt(E$t_),format="%W"))
  E$year <- as.numeric(strftime(as.POSIXlt(E$t_),format="%Y"))
  E$day <- as.numeric(strftime(as.POSIXlt(E$t_),format="%j"))
  str(E)

Here's the messgae from terminal: 
D:\ElephantDataAnalysis\Metrics and RSF>quarto publish quarto-pub
? Publish update to: » https://jj11031.quarto.pub/spatiotemporal-movement-metrics-of-wild-elephants (Quarto Pub - jayjit11031@gmail.com)
Rendering for publish:

processing file: Metrics-and-RSF.rmarkdown
  |.                                       |   3% [Loading essential libraries]trying URL 'http://cran.rstudio.com/bin/windows/contrib/4.3/lattice_0.22-5.zip'
Content type 'application/zip' length 1380440 bytes (1.3 MB)
==================================================
downloaded 1.3 MB

output file: Metrics-and-RSF.knit.md

pandoc
  to: html
  output-file: Metrics and RSF.html
  standalone: true
  section-divs: true
  html-math-method: mathjax
  wrap: none
  default-image-extension: png
  toc: true

metadata
  document-css: false
  link-citations: true
  date-format: long
  lang: en
  bibliography:
    - reference.bib
  title: Spatiotemporal movement metrics of wild elephants
  author: Jayjit Das

[WARNING] Citeproc: citation Benhamou2004 not found
[>] Preparing to publish document
**ERROR: API Error: 404 - Not Found**

Kindly let me know if this helps. Also, I already have my .html file rendered and ready to publish. Still, even after using the "feeze" command in _quarto.yml and the .qmd file, it takes forever to render the document and publish it. Kindly let me know if there's a workaround to fasten the process.

[mcanouil]

@jj11031 Please take few minutes to format all your posts. Those are not legible as the text is currently not distinguishable from outputs and code.

I just try to publish to Quarto Pub and did not encounter any issues. This seems to be either a temporary issue on Quarto Pub (not Quarto CLI), or something in your setup (proxy, firewall, bad internet connection, etc.).

[jj11031]

.qmd file is below

---
title: "Spatiotemporal movement metrics"
author: Jayjit Das
format:
  html:
    toc: true
    warning: false
    freeze: true
bibliography: reference.bib
---

#### Goal: Exploratory data analysis 

In this project, we shall go through various movement metrics to understand spatio-temporal movement of animals. This entire exercise shall consist of data wrangling, analysis and visualizations.

We will derive step lengths (SL), turning angles (TA), net squared displacement (NSD) and explore them to try and make ecological sense of the data.

Step lengths, is the Euclidean distance between two consecutive tracked locations, and turning angles, the angle made by the animal’s turn during three consecutive tracked locations, describe distance and direction, respectively. By accounting for the temporal difference between tracked locations they can be used to evaluate an animal’s speed and tortuosity. Both of these metrics are widely used in movement ecology. @avgar2016a

![](images/Example-of-movement-pathway-in-SSFs-Example-of-how-a-movement-pathway-can-be-simplified.png){width="636"}

Figure above aids in visualizing the step length and turning angle concepts.

Later we will also derive daily movement metrics like Daily Distance Traveled (DDT), Daily Overall Displacement (DOD), Daily Maximum Displacement (DMD) and Straightness of Daily Path (SDP). We shall learn about them in details gradually. 

```{r}
  E$week <- as.numeric(strftime(as.POSIXlt(E$t_),format="%W"))
  E$year <- as.numeric(strftime(as.POSIXlt(E$t_),format="%Y"))
  E$day <- as.numeric(strftime(as.POSIXlt(E$t_),format="%j"))
  str(E)

Output from the terminal is velow: 

output file: Metrics-and-RSF.knit.md

pandoc to: html output-file: Metrics and RSF.html standalone: true section-divs: true html-math-method: mathjax wrap: none default-image-extension: png toc: true

metadata document-css: false link-citations: true date-format: long lang: en bibliography:

• reference.bib title: Spatiotemporal movement metrics of wild elephants author: Jayjit Das

[WARNING] Citeproc: citation Benhamou2004 not found [>] Preparing to publish document ERROR: API Error: 404 - Not Found

The problem is **ERROR: API Error: 404 - Not Found**

Let me know if it helps now. Also, I already have my .html file rendered and ready to publish. Still, even after using the "feeze" command in _quarto.yml and the .qmd file, it takes forever to render the document and publish it. Kindly let me know if there's a workaround to fasten the process.

[mcanouil]

@jj11031 you don't have to post multiple times. Simply use the edit button.

Try in a separate project, with a simple example, without computation. Ensure you don't have proxy/firewall that blocks Quarto Pub.

[github-actions[bot]]

Thank you for using Quarto and reporting an issue!

Unfortunately, this issue is now considered stale because it has been opened since 14 days without providing a "working" reproducible example to help us investigate. If you are still facing the issue, please review the "Bug Reports" guide on how to provide a fully reproducible example as a self-contained Quarto document or a link to a Git repository. Without a reproducible example, it is unlikely that the issue will be addressed.

You can share a Quarto document using the following syntax, i.e., using more backticks than you have in your document (usually four ````).

````qmd
---
title: "Reproducible Quarto Document"
format: html
---

This is a reproducible Quarto document using `format: html`.
It is written in Markdown and contains embedded R code.
When you run the code, it will produce a plot.

```{r}
plot(cars)

The end.