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qupath
/
qupath-extension-instanseg
The official QuPath extension for InstanSeg
https://github.com/instanseg/instanseg
Apache License 2.0
10
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5
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Remove sout
#111
alanocallaghan
closed
1 day ago
0
Fix parsing of pixel size for nan case
#110
alanocallaghan
closed
1 day ago
0
Model versioning and display
#109
alanocallaghan
closed
1 day ago
0
.modelPath has back slashes
#108
lauracmurphy
closed
1 week ago
6
Use QP approach to selecting cores and add selection to history
#107
alanocallaghan
closed
1 day ago
0
Don't select missing cores
#106
alanocallaghan
closed
1 week ago
0
Select all TMA cores in InstanSeg runs on missing cores
#105
lauracmurphy
closed
1 week ago
5
Fix threading bug when image type changes
#104
petebankhead
closed
1 week ago
0
Fix padding, improve output handler
#103
petebankhead
closed
1 week ago
0
Update README.md
#102
finglis
closed
1 month ago
0
Fix paths on Windows
#101
petebankhead
closed
1 month ago
0
Explore handling multiple outputs
#100
petebankhead
opened
1 month ago
0
Using `Pixel Width` and `Pixel Height` is not enough
#99
lacan
closed
1 month ago
1
Need to escape (or reverse) slashes in model path for Windows scripts
#98
petebankhead
closed
1 month ago
0
Optimize post-processing / resolving overlaps
#97
petebankhead
opened
1 month ago
0
Report when measuring objects
#96
petebankhead
closed
1 month ago
0
brightfield nuclei and cells model?
#95
r100gs
closed
1 month ago
1
Use TaskRunner for measurements
#94
petebankhead
closed
1 month ago
0
download error
#93
r100gs
closed
1 month ago
2
Running instanseg script for whole project
#92
mikemcka
closed
1 month ago
2
System properties for debugging
#91
petebankhead
closed
1 month ago
1
Update PruneObjectOutputHandler.java
#90
petebankhead
closed
2 months ago
0
The UI doesn't block for full processing (including measurements)
#89
petebankhead
closed
1 month ago
0
PruneObjectOutputHandler can be unusably slow for complex parent ROIs
#88
petebankhead
closed
1 month ago
3
Update README for v0.6.0-rc1
#87
petebankhead
closed
2 months ago
0
Multiple prompts to download PyTorch
#86
petebankhead
opened
2 months ago
0
Fix PyTorch downloads when required
#85
petebankhead
closed
2 months ago
0
Reduce property change eagerness
#84
petebankhead
closed
2 months ago
0
Update DetectionMeasurer.java
#83
petebankhead
closed
2 months ago
0
Inherit secrets
#82
alanocallaghan
closed
2 months ago
0
Move env variables and bump action versions
#81
alanocallaghan
closed
2 months ago
0
Use gradle setup action instead of validate and build
#80
alanocallaghan
closed
2 months ago
0
Add license, maven publish
#79
petebankhead
closed
2 months ago
0
Refactor actions
#78
alanocallaghan
closed
2 months ago
0
Update README.md
#77
petebankhead
closed
2 months ago
0
Add pixel size warning and minor linting
#76
alanocallaghan
closed
2 months ago
0
Improve Model.toString()
#75
petebankhead
closed
2 months ago
3
Handle stain updates
#74
petebankhead
closed
2 months ago
0
Minor typos
#73
alanocallaghan
closed
2 months ago
0
Create readme
#72
petebankhead
closed
2 months ago
0
Color deconvolution stains are never updated
#71
petebankhead
closed
2 months ago
0
Add tile padding as an option
#70
petebankhead
closed
2 months ago
0
Move model dir choice to top of dialog
#69
petebankhead
closed
2 months ago
4
Fix model downloading bug
#68
petebankhead
closed
2 months ago
0
Local and downloaded models
#67
petebankhead
opened
2 months ago
8
Figure out preferred interTileBounds value
#66
petebankhead
opened
2 months ago
0
Don't report error when user cancels...
#65
petebankhead
closed
2 months ago
0
Support specifying output channels
#64
petebankhead
closed
2 months ago
1
Avoid storing the ImageData in InstanSeg
#63
petebankhead
closed
2 months ago
4
Option improvements
#62
petebankhead
closed
2 months ago
0
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