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raimondilab
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precogx
A predictor of GPCR couplings with G-proteins/B-arrs using Transformers
https://precogx.bioinfolab.sns.it/
GNU General Public License v3.0
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Running Precogx locally
#97
charlieccp
opened
7 months ago
1
Plotly is down (PCA and Attention map not working)
#96
gurdeep330
closed
1 year ago
3
Show multiple sequences on PCA plot simlultaneously
#95
maticmarin
opened
1 year ago
3
Handle different characters in the sequence name
#94
gurdeep330
closed
1 year ago
0
Test cases
#93
gurdeep330
opened
1 year ago
2
Show multiple mutations in the PCA plot
#92
gurdeep330
closed
1 year ago
3
Show attention map on the structure
#91
gurdeep330
opened
2 years ago
0
Improve the Help/FAQs page
#90
gurdeep330
closed
2 years ago
0
Change the text of Attention map and contacts
#89
gurdeep330
closed
2 years ago
0
Put sequence and heatmap together (dropdown) in the second row
#88
gurdeep330
closed
2 years ago
0
Update about.html
#87
maticmarin
closed
2 years ago
0
doesnt show GNAO1 experimental values of shedding assay for GPCRs
#86
maticmarin
closed
2 years ago
1
change B to greek beta in the table
#85
gurdeep330
closed
2 years ago
0
Examples on the home page
#84
gurdeep330
opened
2 years ago
0
"Need a quick intro?" does not work with new layout
#83
gurdeep330
closed
2 years ago
0
Major revisions
#82
gurdeep330
closed
2 years ago
0
pca color of points
#81
maticmarin
closed
2 years ago
1
classification update
#80
maticmarin
closed
2 years ago
0
updated contact prediction labels
#79
maticmarin
closed
2 years ago
0
Add checkboxes in the structure panel (AF and PDB)
#78
gurdeep330
closed
2 years ago
0
Add mutation label in sequence and structure panels
#77
gurdeep330
closed
2 years ago
0
pca plot
#76
maticmarin
closed
2 years ago
4
Move to Mol*
#75
gurdeep330
opened
2 years ago
0
new pca values
#74
maticmarin
closed
2 years ago
2
Add the Attention maps at the frontend
#73
gurdeep330
closed
2 years ago
0
Add Attention maps at the backend
#72
gurdeep330
closed
2 years ago
1
error with the model for GNA15, wrong model given
#71
maticmarin
closed
2 years ago
0
All the layers
#70
gurdeep330
closed
2 years ago
3
add AlphaFold complexes for 3D visualization
#69
gurdeep330
closed
2 years ago
5
Update formatInputFile function in precogx.py
#68
gurdeep330
closed
2 years ago
0
embedding saved in npy for tsne and umap
#67
maticmarin
closed
2 years ago
1
pca plots for all layers
#66
maticmarin
closed
2 years ago
2
update pca plots in precogx webapp with new one
#65
maticmarin
closed
2 years ago
4
Updating pca plots with scaled ones
#64
maticmarin
closed
2 years ago
1
Updating contact prediction
#63
maticmarin
closed
2 years ago
2
Shiny app to show PCA plots
#62
gurdeep330
closed
2 years ago
0
Add a slider range in Structure panel too (sync it with Seq panel)
#61
gurdeep330
closed
2 years ago
0
Help button for predicted contacts invisible
#60
gurdeep330
closed
2 years ago
1
Error page
#59
gurdeep330
closed
2 years ago
0
IUPHAR info not available when input of UnitProt format (sp/tr | * | *)
#58
gurdeep330
closed
2 years ago
0
Structures not visible for WT
#57
gurdeep330
closed
2 years ago
0
Examples on home page
#56
gurdeep330
closed
2 years ago
0
Make toggle buttons more descriptive in Seq/Contacts panel
#55
gurdeep330
closed
2 years ago
0
Make Sequence legend more descriptive
#54
gurdeep330
closed
2 years ago
0
Rename contacts to predicted contacts
#53
gurdeep330
closed
2 years ago
1
Show IUPHAR class/family information too
#52
gurdeep330
closed
2 years ago
0
Contact map in order
#51
gurdeep330
closed
2 years ago
0
Reduce the label size in structure
#50
gurdeep330
opened
2 years ago
0
Remove distance label from Structure panel
#49
gurdeep330
closed
2 years ago
0
VAR = IUPHAR should be renamed to IUPHAR/STRING or have another for STRING
#48
gurdeep330
closed
2 years ago
0
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