SNAPPER

BEAST 2 based package for SNP analyses -- difussion based SNAPP.

Installation

• Install BEAST 2 (available from http://beast2.org).
• Install snapper package through the package manager (this automatically installs the SNAPP package as well)

Tutorial

Divergence-time estimation with SNAPPER presented by Michael Matschiner

Citing snapper

Marnus Stoltz, Boris Bauemer, Remco Bouckaert, Colin Fox, Gordon Hiscott, David Bryant. Bayesian inference of species trees using diffusion models, Systematic Biology, 2020 DOI:10.1093/sysbio/syaa051

arXiv preprint arXiv:1909.07276, 2019.

Questions about snapper

BEAST user list: https://groups.google.com/forum/#!forum/beast-users

Marnus Stoltz: stoltzstep@gmail.com

David Bryant: david.bryant@otago.ac.nz