Closed bsweger closed 1 month ago
Background
@rogersbw Has a repo that contains his work to generate a list of COVID clades that will be predicted for each round of the upcoming covid-variant-nowcast hub: https://github.com/rogersbw/clade_data_utils/
@elray1 and I discussed where the various pieces of the variant nowcast hub code should live and propose:
data_prep
clades_to_model
data_utility.py
virus-clade-utils
Definition of done
Background
@rogersbw Has a repo that contains his work to generate a list of COVID clades that will be predicted for each round of the upcoming covid-variant-nowcast hub: https://github.com/rogersbw/clade_data_utils/
@elray1 and I discussed where the various pieces of the variant nowcast hub code should live and propose:
data_prep
andclades_to_model
functions (data_utility.py
) move to thevirus-clade-utils
repoDefinition of done
data_prep
function tovirus-clade-utils
clades_to_model
function tovirus-clade-utils