Closed bsweger closed 1 month ago
Background
Based on a recent e-mail thread, we learned that there is a more straightforward way to interact with Nextclade tooling (findings and examples documented in this issue).
Not only will adopting this process align us with Nextstrain's usage of these tools, but it will simplify the code base.
Definition of Done
nextclade dataset get
nextclade run
Background
Based on a recent e-mail thread, we learned that there is a more straightforward way to interact with Nextclade tooling (findings and examples documented in this issue).
Not only will adopting this process align us with Nextstrain's usage of these tools, but it will simplify the code base.
Definition of Done
nextclade dataset getto retrieve tree and reference strain (instead of calling their API)nextclade run