qPCR is a package designed for wrangling and analyzing raw excel qPCR data output from QuantStudio Applied Biosystems instruments
You can install the released version of qPCR from Github with:
install.packages("qPCR")
library(qPCR)
qPCR_df <- load_raw() %>%
tidy_qPCR() %>%
dCt() %>%
ddCt()