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rickhelmus
/
patRoon
Workflow solutions for mass-spectrometry based non-target analysis.
https://rickhelmus.github.io/patRoon/
GNU General Public License v3.0
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Error: Visualization: plotVenn(): diagram cut off
#65
LeonSaal
closed
9 months ago
2
Question: reporting: Increase resolution of plots
#64
LeonSaal
closed
1 year ago
2
added possibility to subselect analyses #60
#63
LeonSaal
closed
1 year ago
3
Error: newProject(): General/Insert code into/Current file does not work
#62
LeonSaal
closed
1 year ago
1
Suggestion: newProject(): Save UI-Input as configuration file
#61
LeonSaal
closed
1 year ago
2
Suggestion: newProject(): Add remove button to Analyses/Generate analysis information/Load in script
#60
LeonSaal
closed
1 year ago
3
MetaClean labels flipped
#59
LeonSaal
closed
1 year ago
1
generateFormulas() and generate Compounds() errors
#58
SivanXW
closed
1 year ago
2
Feature Suggestion: Import SIRIUS results (formula & compound)
#57
drewszabo
opened
1 year ago
1
isolatePrec argument filtering MSMS peaks
#56
drewszabo
closed
1 year ago
3
Memory usage for generateMSPeakLists()
#55
akogler
closed
1 year ago
2
Workaround for annotateSuspects() using SIRIUS?
#54
drewszabo
closed
2 years ago
7
Error during findFeatures() and optimizeFeatureFinding()
#53
akogler
closed
2 years ago
3
screenSuspects fatal error
#52
rachsmo
closed
2 years ago
6
Linking parents and TPs... Error generating the `precursor` object
#51
chirsir
closed
1 year ago
3
FindFeatures issue with example data
#50
kbrigit
closed
1 year ago
2
Patroon issues
#49
aasimmusaali
closed
2 years ago
3
Dependency broken - off CRAN
#48
wesleyburr
closed
2 years ago
2
parallelism and timeouts errors
#47
gilcu3
opened
2 years ago
6
[JOSS Review] Bug: `findFeaturesXCMS` and `findFeaturesXCMS3` fail on Windows
#46
hechth
closed
2 years ago
1
[JOSS Review] Bug: `findFeaturesSIRIUS(...)` fails
#45
hechth
closed
2 years ago
2
[JOSS Review]: Document option to use SAFD
#44
hechth
closed
2 years ago
2
[JOSS Review] Bug: Let `findFeatures` functions also accept files which have lowercase file extension
#43
hechth
closed
2 years ago
1
[JOSS Review] BUG: Can't centroid `mzml` data using `convertMSFiles`
#42
hechth
closed
2 years ago
8
[JOSS Review] Update overview graphics
#41
hechth
closed
2 years ago
8
[JOSS Review] State of the field: Do the authors describe how this software compares to other commonly-used packages?
#40
hechth
closed
2 years ago
1
[JOSS Review] Handbook `single page` and `book format` don't match
#39
hechth
closed
2 years ago
2
[JOSS Review] BUG: `generatePeakListsMzR` failes with feature groups from KPIC2
#38
hechth
closed
2 years ago
1
[JOSS Review] BUG: Building rstudio docker image fails
#37
hechth
closed
2 years ago
5
[JOSS Review] BUG: `groupFeaturesKPIC2` fails after `findFeaturesXCMS` if `loadRawData = TRUE`
#36
hechth
closed
2 years ago
7
[JOSS Review] Create individual doc page for every function and class in handbook
#35
hechth
closed
2 years ago
2
[JOSS Review] Make file extension for supported MS file types case insensitive
#34
hechth
closed
2 years ago
1
[JOSS Review] `generateAnalysisInfo` function parameters documentation
#33
hechth
closed
2 years ago
1
[JOSS Review] Fix citations DOIs
#32
hechth
closed
2 years ago
8
Typo in KPIC2 default feature param ranges
#31
coltonlloyd
closed
2 years ago
1
findFeatures error
#30
rachsmo
closed
2 years ago
2
fGroups issue
#29
Begotalavera
closed
2 years ago
2
small typo in the install script
#28
mrtbru
closed
2 years ago
1
Potential bug in optimizeFeatureGrouping of XCMS3 parameters
#27
coltonlloyd
closed
3 years ago
1
peak areas altered after conversion and fillChromPeaks()
#26
stolltho
closed
3 years ago
3
featureGrouping error
#25
stolltho
opened
3 years ago
4
feature suggestion: include refineChromPeaks in xcms3 feature finding optimization
#24
tew42
opened
3 years ago
0
issue with matchedFilter (another small xcms3 optimization bug)
#23
tew42
closed
3 years ago
1
issue with xcms3 peakgroups
#22
tew42
closed
3 years ago
1
xcms3 optimizeFeatureFinding requires pre-loading library(xcms)
#21
tew42
closed
3 years ago
2
Create CITATION.cff
#20
egonw
closed
3 years ago
2
OpenMS returning lots of zeroes
#19
stolltho
closed
3 years ago
3
Issues using docker image
#18
AldanaJ
closed
3 years ago
2
Problem finding feature with openms
#17
mafreitas
closed
3 years ago
9
Error while running findFeatures
#16
tsufz
closed
3 years ago
4
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