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roblanf
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MixtureModelHMM
Post-processes the output of phylogenetic mixture models using HMMs
GNU General Public License v2.0
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error in save_report: template 'HMM_report' was not found in the MixtureModelHMM package
#20
jeremiasivan
closed
1 year ago
3
set up conda environment for this package
#19
roblanf
opened
2 years ago
0
plot_scatter gsub breaks file paths in run_HMM
#18
fredjaya
opened
2 years ago
0
error on library(MixtreModelHMM)
#17
roblanf
closed
2 years ago
4
add progress bars to `run_HMM`
#16
roblanf
opened
2 years ago
1
add the scatter plot into the hmm_result
#15
roblanf
closed
2 years ago
3
remove transition plot, add transition probability table
#14
roblanf
closed
2 years ago
1
partition file output
#13
roblanf
closed
2 years ago
10
bug in save_file()
#12
roblanf
closed
2 years ago
1
bug in save_report
#11
roblanf
closed
2 years ago
1
add plots and table to the hmm result class
#10
roblanf
closed
2 years ago
0
make hmm result a class
#9
roblanf
closed
2 years ago
0
add a transitions data frame
#8
roblanf
closed
2 years ago
0
make a function to output a partition file
#7
roblanf
closed
2 years ago
0
fill out Description of the approach
#6
roblanf
opened
2 years ago
1
fill out the ## What is MixtureModelHMM
#5
roblanf
opened
2 years ago
1
change save_file<-function(pred,algo,file_name){
#4
roblanf
closed
2 years ago
0
add warning for not converged
#3
roblanf
closed
2 years ago
0
change run_HMM function to output only one of viterbi or posterior decoding
#2
roblanf
closed
2 years ago
0
change variable and function names
#1
roblanf
closed
2 years ago
0