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rochefort-lab
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fissa
A Python toolbox for Fast Image Signal Separation Analysis, designed for Calcium Imaging data.
GNU General Public License v3.0
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DOC: Update intersphinx mappings
#193
scottclowe
closed
3 years ago
1
MNT: Change separator _ to - in requirement.txt filenames
#192
scottclowe
closed
3 years ago
1
RF: Use Mixin class for extraction tests
#191
scottclowe
closed
3 years ago
1
CI: Report notebook coverage
#190
scottclowe
closed
3 years ago
1
CI: Add .codecov.yml to allow small decreases in coverage
#189
scottclowe
closed
3 years ago
1
RF: Refactor neuropil.separate
#188
scottclowe
closed
3 years ago
1
RF: Migrate duplicated rois2masks code to function in roitools
#187
scottclowe
closed
3 years ago
1
RF: Don't do init as list of strings
#186
scottclowe
closed
3 years ago
1
REL: Split test and dev requirements
#185
scottclowe
closed
3 years ago
1
DOC: Add a redirect from gh-pages base to readthedocs
#184
scottclowe
closed
3 years ago
1
DOC: Change theme to pydata
#183
scottclowe
closed
3 years ago
1
DOC: Add elastic search on readthedocs
#182
scottclowe
closed
3 years ago
1
JNB:BUG: Updated Suite2P example workflow for new Suite2p API and multiprocessing bug
#181
swkeemink
closed
3 years ago
12
JNB: Blacken notebooks
#180
scottclowe
closed
3 years ago
2
ENH: Lazy tifffile
#179
scottclowe
closed
3 years ago
4
CI: Add workflow deploying notebooks on github pages
#178
scottclowe
closed
3 years ago
4
RF+ENH+BUG: Use npz for cache; store means
#177
scottclowe
closed
3 years ago
1
BUG: Inaccurate means for float16 TIFFs
#176
scottclowe
closed
3 years ago
1
DOC: Docstring and README improvements
#175
scottclowe
closed
3 years ago
1
MNT: Resolve deprecation warnings
#174
scottclowe
closed
3 years ago
1
CI: Stop pushing to coveralls
#173
scottclowe
closed
3 years ago
1
BUG: Stop always unnecessarily redoing separate
#172
swkeemink
closed
3 years ago
2
BUG: Don't needlessly redo prep
#171
scottclowe
closed
3 years ago
1
Update the tif reading testing and implementation
#170
swkeemink
closed
3 years ago
8
ENH+API: Add functional interface
#169
scottclowe
closed
3 years ago
12
TST:MNT: Tidy up core test code
#168
scottclowe
closed
3 years ago
0
DOC: Fix some docstrings
#167
scottclowe
closed
3 years ago
1
DOC: Add shebang and executable flag to example scripts
#166
scottclowe
closed
3 years ago
1
JNB: Improve description of main output
#165
scottclowe
closed
3 years ago
1
MNT: Use ndarray for all outputs, not list for some
#164
scottclowe
closed
3 years ago
1
RF: Tidy up
#163
scottclowe
closed
3 years ago
1
DOC: Tidy up docstrings
#162
scottclowe
closed
3 years ago
1
DEV: Add basic pre-commit
#161
scottclowe
closed
3 years ago
0
CI: Trim down number of jobs running on Travis and AppVeyor
#160
scottclowe
closed
3 years ago
1
CI: Fix travis build
#159
scottclowe
closed
3 years ago
1
DOC: Change test badge from Travis to GHA
#158
scottclowe
closed
3 years ago
0
DOC: Fix docs preventing docs from building
#157
scottclowe
closed
3 years ago
0
API: Datahandler now functions as a class
#156
swkeemink
closed
3 years ago
7
Too much printed feedback
#155
swkeemink
closed
3 years ago
6
CI: Add tests with GitHub Actions
#154
scottclowe
closed
3 years ago
0
DOC: Minor README updates
#153
scottclowe
closed
3 years ago
0
Update .gitignore and .gitattributes
#152
scottclowe
closed
3 years ago
0
Installation via pip into conda environment on Windows
#151
PTRRupprecht
opened
3 years ago
7
Update Suite2P implementation
#150
swkeemink
closed
2 years ago
16
Change the number of iterations and trials
#149
foustoukosg
closed
3 years ago
4
ValueError: Wrong ROIs input format: unfamiliar shape.
#148
foustoukosg
closed
3 years ago
8
Stuck on 'Doing signal separation...'
#147
pocky12
opened
3 years ago
15
Bugs in exp.separate
#146
Hanbing1999
opened
4 years ago
3
MNT: Capture ellipse roi type as well as freehand subtype
#145
scottclowe
closed
4 years ago
1
CI: Travis don't test Py3.5 on OSX
#144
scottclowe
closed
4 years ago
0
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