Closed rpeltekov closed 3 months ago
trying to get the second task working. stumbling here where too many slices are selected...
it looks like to get the "doAllShimmedScans" selecting the correct slices to actually attempt shimming on, the easiest marker / sign of a valid slice with signal after ROI selection is found by whether the slice of the BackgroundB0Map contains any statistics. i.e. is shimTool.shimStats[0][i] is None.
moving the rest to a new issue, #19 , because we have reached pre-refactor performance, passing it now with the phase unwrapping already being implemented. this "bug" has been reached, and to declutter we close it