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rrwick
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Unicycler
hybrid assembly pipeline for bacterial genomes
GNU General Public License v3.0
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weird choice of "best assembly"
#285
jflot
opened
2 years ago
3
Releasing Unicycler v0.5.0 on conda as a package?
#284
wanyuac
closed
2 years ago
4
Java dependency check uses incorrect regex
#283
aruginkgo
closed
2 years ago
3
How to make hybrid assembly of a viral genome
#282
sekhwal
closed
2 years ago
1
Segfault error during hybrid assembly - aligning long read step
#281
naturepoker
closed
2 years ago
1
Unicycler won't run - Dependency issue samtools?
#280
peflanag
closed
2 years ago
2
add an option in Unicycler to pass down --phred-offset 33 to SPAdes
#279
jflot
closed
2 years ago
1
Telomeres
#278
hbadrane
closed
2 years ago
1
unused/unassembled long reads
#277
hbadrane
closed
2 years ago
1
Difficulty using --existing_long_read_assembly
#276
SandersonHaley
closed
2 years ago
1
Spades update
#275
kayobianco
closed
2 years ago
1
Single end assembly in unicycler?
#274
appliedmicrobiologyresearch
closed
2 years ago
4
Extracting all circular paths from assembly graph?
#273
jnesme
opened
2 years ago
0
Option to rotate "incomplete" replicons
#272
nataquinones
opened
2 years ago
0
options: --keep 2, --vcf
#271
manolis2023
closed
2 years ago
1
two pairs of short reads
#270
herber4
closed
2 years ago
1
v0.4.9 -- spades.py 3.13.1 too new
#269
manolis2023
closed
2 years ago
1
Swap Racon repository URLs
#268
lebovic
closed
2 years ago
0
Unicycler with Ion Torrent
#267
nclaesnacw
opened
2 years ago
2
How to determine coverage of Oxford Nanopore reads
#266
termithorbor
closed
2 years ago
1
Polishing assembly with Pilon Unable to polish assembly using Pilon: bowtie2-build failed to build an index
#265
nbutyrate
closed
2 years ago
1
Problem of "terminate called after throwing an instance of 'std::bad_alloc'".
#264
monjou-lai
opened
3 years ago
1
Newest release version 0.4.9 not on bioconda
#263
hoelzer
opened
3 years ago
0
Unicycler hangs on polishing step
#262
valery-shap
closed
3 years ago
2
Plasmid losts
#261
bifidoman
opened
3 years ago
1
Feature Request: Renaming Headers in Bridged Assembly Graph and Completed Replicons
#260
jshanUCI
opened
3 years ago
0
unicycler.vcf_func.CannotMakeVcf:
#259
hafizmtalha
closed
2 years ago
1
SPAdes crashing only with Unicycler
#258
sivankij
closed
3 years ago
0
Different results when searching for contamination
#257
termithorbor
opened
3 years ago
0
unicycler stalls indefinitely while 'creating simple long read bridges'
#256
biolene
closed
2 years ago
3
Output assembly prefix
#255
hkaspersen
opened
3 years ago
0
Assembly Graph as Input?
#254
geboro
opened
3 years ago
0
Short Assembly
#253
herber4
opened
3 years ago
0
genome circular issue about unicycler?
#252
wanjinhu
opened
3 years ago
1
Spades 3.12, 3.13 and 3.9 crashes but not 3.14
#251
lalalagartija
closed
2 years ago
2
run time of Aligning reads
#250
fanshu1986
opened
3 years ago
1
Odoo 11 - Python MemoryError
#249
newodoo
closed
3 years ago
1
Unicycler: SPAdes crash without log file
#248
gaferguz
opened
3 years ago
3
Unicycler and Canu failed to assemble viral genome
#247
kinza-asif
opened
3 years ago
0
bowtie2-build error message
#246
williamorsi
closed
2 years ago
1
TypeError: '<' not supported between instances of 'NoneType' and 'int'
#245
Selucote82
closed
2 years ago
1
Version request on Spades.py
#244
abcdtree
closed
2 years ago
2
Absolute read depth calculation
#243
AustinHartman
opened
3 years ago
1
Stuck on SPADES assembly
#242
igorspp
opened
3 years ago
0
Error installing latest version of Unicycler
#241
admontecillo0428
opened
4 years ago
1
Question: improve assembly with reference
#240
matthieu-haudiquet
opened
4 years ago
0
Rotate circular contigs in standalone unicycler_polish?
#239
bjreisman
closed
2 years ago
1
Feature request: Allow merged short reads input
#238
simonrharris
opened
4 years ago
0
Hybrid assembly stuck at removing graph overlaps
#237
sihellem
opened
4 years ago
0
Hybrid assembly
#236
efratca
opened
4 years ago
0
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