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rzshrote
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pybrops
Python Breeding Optimizer and Simulator: A Python library for simulating and optimizing breeding pipelines.
https://rzshrote.github.io/pybrops/
MIT License
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add example for wheat OCS
#92
rzshrote
closed
6 months ago
0
Expand API to allow for Matrix selection by string or array of strings
#91
rzshrote
opened
7 months ago
0
Re-work Selection Protocol/Selection Problem Interface
#90
rzshrote
opened
8 months ago
0
Rrblupml
#89
rzshrote
closed
8 months ago
0
Improve website, examples, add RR-BLUP
#88
rzshrote
closed
8 months ago
0
Finalize documentation for initial release
#87
rzshrote
closed
9 months ago
0
improve website and examples
#86
rzshrote
closed
1 year ago
0
website and readme update
#85
rzshrote
closed
1 year ago
0
add examples to website
#84
rzshrote
closed
1 year ago
0
update website and examples
#83
rzshrote
closed
1 year ago
0
Update website
#82
rzshrote
closed
1 year ago
0
Update website for small demo
#81
rzshrote
closed
1 year ago
0
Replace DEAP with PyMOO
#80
rzshrote
closed
1 year ago
0
Looking for documentation / API
#79
mika-okamoto
closed
9 months ago
2
Remove `rpy2` from codebase
#78
rzshrote
closed
1 year ago
0
Add an Expected Maximum Breeding Value Matrix class in the `bvmat` submodule.
#77
rzshrote
closed
1 year ago
1
Consider eliminating multiple inheritance in most cases
#76
rzshrote
closed
1 year ago
1
GEBV calculation from additive linear genomic model may occasionally induce NaN values
#75
rzshrote
closed
1 year ago
1
Create separate class hierarchies for genomes and genotypes
#74
rzshrote
opened
1 year ago
0
Use abstract classes formally in PyBrOpS using abc module
#73
rzshrote
closed
1 year ago
0
Create a unified method/architecture of handling optimization constraints
#72
rzshrote
closed
1 year ago
1
Consider better ways to create variance matrices
#71
rzshrote
opened
1 year ago
1
Merge changes for first public commit
#70
rzshrote
closed
1 year ago
0
Add additional optimization protocols
#69
rzshrote
closed
1 year ago
0
Example mocgs
#68
rzshrote
closed
2 years ago
0
OCS implementation with NSGA-III
#67
rzshrote
closed
2 years ago
0
Issue47
#66
rzshrote
closed
2 years ago
0
Issue62
#65
rzshrote
closed
2 years ago
0
Improve DataFrames by removing them
#64
rzshrote
closed
1 year ago
0
Remove unnecessary conditional error checks
#63
rzshrote
closed
1 year ago
1
Improve documentation
#62
rzshrote
closed
2 years ago
0
Issue50
#61
rzshrote
closed
2 years ago
0
change pybropt to pybrops
#60
rzshrote
closed
2 years ago
0
Pybrops rename
#59
rzshrote
closed
2 years ago
0
Issue55
#58
rzshrote
closed
2 years ago
0
Potentially implement generic cross structures
#57
rzshrote
opened
2 years ago
1
Improve how LinearGenomicModels are structured.
#56
rzshrote
closed
2 years ago
1
Fix pybropt.breed.prot.sel modules that do not conform to interface.
#55
rzshrote
closed
2 years ago
0
Change output type for 'select' functions
#54
rzshrote
closed
1 year ago
0
Fix Sphinx documentation warnings
#53
rzshrote
closed
2 years ago
1
Issue46
#52
rzshrote
closed
2 years ago
0
Add plotting functionality for BreedingValueMatrix class.
#51
rzshrote
opened
2 years ago
0
Fix location-scale bug in BreedingValueMatrix classes
#50
rzshrote
closed
2 years ago
1
Change output type from 'pareto' functions
#49
rzshrote
closed
1 year ago
1
Fix interfaces in pybropt.breed.prot
#48
rzshrote
closed
2 years ago
2
pybropt.core.random seed set does not work
#47
rzshrote
closed
2 years ago
1
Create examples
#46
rzshrote
closed
2 years ago
0
Issue43
#45
rzshrote
closed
3 years ago
0
Use NetworKit to keep track of pedigrees
#44
rzshrote
opened
3 years ago
1
Get minimum functionality for final architecture
#43
rzshrote
closed
3 years ago
0
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