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saeyslab
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napari-sparrow
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enhance plot_shapes
#104
lopollar
opened
1 year ago
2
fix filter_on_size
#103
TaeWooJung
closed
1 year ago
0
add xarray plotting to notebooks
#102
lopollar
closed
1 year ago
1
dask: make allocation possible
#101
lopollar
closed
1 year ago
1
Adapt code to BGI data
#100
lopollar
closed
1 year ago
1
Make it possible to restart at every step
#99
lopollar
closed
1 year ago
7
Add different types of gene allocation
#98
lopollar
closed
1 year ago
1
Adapt code to Xenium data
#97
lopollar
opened
1 year ago
0
Add Baysor for cell segmentation
#96
rseurinc
closed
2 months ago
3
Plot all masks types in napari
#95
berombau
opened
1 year ago
4
Link to scverse cookiecutter
#94
berombau
opened
1 year ago
1
Interactive exploring of AnnData
#93
berombau
opened
1 year ago
1
Make all tests work again
#92
KoenDesplenter
opened
1 year ago
0
Feature extraction
#91
KoenDesplenter
closed
1 year ago
0
Support multichannel images in pipeline
#90
KoenDesplenter
closed
1 year ago
1
Add documentation to simply view existing pipeline output
#89
berombau
opened
1 year ago
0
Rename visualize step to export step
#88
berombau
closed
1 year ago
0
Allow interoperability with napari-assistant
#87
berombau
opened
1 year ago
0
Rewrite create_dataset.py with main
#86
KoenDesplenter
closed
1 year ago
0
Plugin step description
#85
KoenDesplenter
opened
1 year ago
0
Out of memory error segmentation step plant data
#84
KoenDesplenter
closed
1 year ago
1
Output Hydra config from napari
#83
berombau
opened
1 year ago
1
Better integration of napari-spatialdata
#82
berombau
opened
1 year ago
0
image feature extraction with translated subset
#81
KoenDesplenter
closed
1 year ago
0
Feature extraction
#80
KoenDesplenter
closed
1 year ago
0
Plugin subset
#79
KoenDesplenter
closed
1 year ago
0
Napari plugin
#78
KoenDesplenter
closed
2 years ago
0
Support Akoya data
#77
berombau
closed
1 year ago
2
Define dependencies for Python package
#76
berombau
opened
2 years ago
2
Use progress bar
#75
berombau
opened
2 years ago
0
Use more notifications
#74
berombau
closed
2 years ago
0
No valid genes were passed for scoring
#73
berombau
closed
1 year ago
1
Logarithmize in allocation step
#72
berombau
closed
1 year ago
1
Add guide text to each step
#71
berombau
closed
2 years ago
0
Stitching/Registration step
#70
berombau
closed
1 year ago
2
Add AnnData to napari.Layer
#69
berombau
closed
2 years ago
0
Support Stereo-seq data
#68
berombau
opened
2 years ago
1
Support VizGen dataset
#67
berombau
closed
1 year ago
0
Analysis
#66
KoenDesplenter
closed
2 years ago
0
Fix issue scoreGenesPlots
#65
KoenDesplenter
closed
2 years ago
0
Default colormap for scoregenesplot
#64
KoenDesplenter
closed
2 years ago
0
Single and multi CLI
#63
berombau
closed
2 years ago
1
Generalize pipeline
#62
KoenDesplenter
closed
2 years ago
0
Analyze multirun results
#61
berombau
closed
2 years ago
3
Plot error
#60
berombau
closed
2 years ago
1
Multisample
#59
berombau
closed
2 years ago
0
Ensure all plot functions are controlled
#58
berombau
closed
2 years ago
0
Testing the pipeline
#57
berombau
opened
2 years ago
0
InterpolationResolutionError on -m
#56
berombau
opened
2 years ago
0
Hpc
#55
berombau
closed
2 years ago
0
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