saezlab CollecTRI issues

saezlab / CollecTRI

Gene regulatory network containing signed transcription factor-target gene interactions

GNU General Public License v3.0

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issues

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OmnipathR::collectri(organism=9606L, genesymbols=TRUE, loops=TRUE) ERROR

#22 LorNic97 opened 1 day ago
0
decoupleR::get_collectri error

#21 cf98 opened 4 days ago
15
Missing TF in mouse TRI network

#20 thnbio opened 3 months ago
1
decoupleR::get_collectri 403 error

#19 mfranke-2 opened 4 months ago
6
CollecTRI interaction confidence level and reference retrieval

#18 Sophon-0 opened 5 months ago
1
commercial use of collectri

#17 annarerra opened 5 months ago
3
problem with collectri package in R

#16 annarerra closed 5 months ago
2
How to filter non-academic use license resources

#15 romunov closed 5 months ago
4
Loading mouse regulons returns human regulons

#14 annasen opened 8 months ago
8
What are the differences between raw regulons and processed regulons?

#13 feather-W closed 10 months ago
2
decoupleR::get_collectri() returns always human regulons

#12 riederd closed 11 months ago
3
Fixed readme

#11 PauBadiaM closed 1 year ago
0
Error in collectri example

#10 pietrisko closed 1 year ago
2
ValueError: Invalid value `loops` for `InteractionsQuery`. Valid options are

#9 nbutyrate closed 8 months ago
9
High activity but no expression of a TF

#8 BastiDucreux closed 1 year ago
2
Where can I find the CollecTRI rda file or data file for consumption when not working with R or Python?

#7 pcm32 closed 1 year ago
2
Question about estimating TF activity

#6 joan-yanqiong closed 1 year ago
1
fixed file paths and mislabelled columns

#5 robinfallegger closed 1 year ago
0
code review and bug fixing

#4 robinfallegger closed 1 year ago
0
attempt to remove SettingWithCopyWarning

#3 robinfallegger closed 1 year ago
0
added conda environment with dependencies

#2 robinfallegger closed 1 year ago
0
fixed typo and GRN bug in weights

#1 robinfallegger closed 1 year ago
0