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saezlab
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CollecTRI
Gene regulatory network containing signed transcription factor-target gene interactions
GNU General Public License v3.0
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omnipathdb.org is down
#23
karJac
closed
1 month ago
0
OmnipathR::collectri(organism=9606L, genesymbols=TRUE, loops=TRUE) ERROR
#22
LorNic97
closed
1 month ago
2
decoupleR::get_collectri error
#21
cf98
opened
2 months ago
15
Missing TF in mouse TRI network
#20
thnbio
closed
1 month ago
1
decoupleR::get_collectri 403 error
#19
mfranke-2
closed
1 month ago
6
CollecTRI interaction confidence level and reference retrieval
#18
Sophon-0
closed
1 month ago
1
commercial use of collectri
#17
annarerra
closed
1 month ago
3
problem with collectri package in R
#16
annarerra
closed
7 months ago
2
How to filter non-academic use license resources
#15
romunov
closed
7 months ago
4
Loading mouse regulons returns human regulons
#14
annasen
closed
1 month ago
11
What are the differences between raw regulons and processed regulons?
#13
feather-W
closed
12 months ago
2
decoupleR::get_collectri() returns always human regulons
#12
riederd
closed
1 year ago
3
Fixed readme
#11
PauBadiaM
closed
1 year ago
0
Error in collectri example
#10
pietrisko
closed
1 year ago
2
ValueError: Invalid value `loops` for `InteractionsQuery`. Valid options are
#9
nbutyrate
closed
10 months ago
9
High activity but no expression of a TF
#8
BastiDucreux
closed
1 year ago
2
Where can I find the CollecTRI rda file or data file for consumption when not working with R or Python?
#7
pcm32
closed
1 year ago
2
Question about estimating TF activity
#6
joan-yanqiong
closed
1 year ago
1
fixed file paths and mislabelled columns
#5
robinfallegger
closed
1 year ago
0
code review and bug fixing
#4
robinfallegger
closed
1 year ago
0
attempt to remove SettingWithCopyWarning
#3
robinfallegger
closed
1 year ago
0
added conda environment with dependencies
#2
robinfallegger
closed
1 year ago
0
fixed typo and GRN bug in weights
#1
robinfallegger
closed
1 year ago
0