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saezlab
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ccc_protocols
LIANA x Tensor-cell2cell Protocols
https://ccc-protocols.readthedocs.io
MIT License
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dependence conflict
#19
LJZYaaa
opened
1 week ago
0
Possible to run liana_tensor_c2c function with external_resource/orthologs?
#18
SteGruener
opened
2 weeks ago
2
can't run bash -i setup_env.sh --conda --gpu --kernel (python 3.10); the env is incompatible in python 3.7 when installing liana-py liana-R pytorch cell2cell togather
#17
huiyijiangling
closed
1 month ago
2
Pathway issue
#16
SimonE1220
opened
6 months ago
6
c2c.analysis.run_tensor_cell2cell_pipeline() Error
#15
SimonE1220
opened
6 months ago
7
about the resource of liana+cell2cell and further L-R pairs determination of among cell cell communication
#14
xflicsu
opened
8 months ago
3
Added new visualizations (networks and heatmaps) and spatial analysis (only for Python)
#13
earmingol
closed
10 months ago
0
Pbmc
#12
dbdimitrov
closed
11 months ago
0
Error in GSEA step 10: c2c$external$generate_lr_geneset
#11
RMOsborn012
closed
8 months ago
6
Integrated Webpage deployment
#10
dbdimitrov
closed
1 year ago
2
Gini coeffs Python vs R
#9
dbdimitrov
closed
8 months ago
3
Interoperability in an independent file
#8
dbdimitrov
closed
1 year ago
1
Frequent Questions Page
#7
dbdimitrov
closed
1 year ago
0
Quick start code = manuscript code?
#6
earmingol
closed
1 year ago
7
Add tool GHs to webpage + cite the paper once we send to Biorxiv
#5
dbdimitrov
closed
1 year ago
1
Add diagrams to Readme & docs index
#4
dbdimitrov
closed
1 year ago
1
Doublet vs Total counts filtering
#3
dbdimitrov
closed
1 year ago
2
Change Seurat to SCE in R Preprocessing
#2
dbdimitrov
closed
1 year ago
4
Update protocols
#1
dbdimitrov
closed
1 year ago
1