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saezlab
/
visium_heart
Spatial transcriptomics of heart tissue
GNU General Public License v3.0
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batch lables missing for snRNA-seq integration
#18
lengfei5
closed
4 months ago
2
Rscript (trajectory_ArchR.R) in trajectory analysis
#17
xixiYan722
opened
9 months ago
0
typos in !is.na(si)
#16
howtofindme
opened
11 months ago
0
incomplete contents in your convert_rds_to_h5ad_visium.ipynb file
#15
howtofindme
opened
1 year ago
2
Where is get_cell_states.R file?
#14
Fanzwstatis
closed
12 months ago
2
Would you mind releasing scripts related to match ATAC and RNA?
#13
frucelee
closed
1 year ago
2
Where is ArchRProject files?
#12
wanglu2014
opened
1 year ago
0
Celltypes for deconvoluion
#11
wangzlgithub
closed
8 months ago
1
null for rownames(proj)
#10
ellyhung
opened
1 year ago
6
Cell type clustering
#9
Kai6662
closed
1 year ago
2
About the file annotation.rds in get_states_dea.R
#8
jianlion
closed
1 year ago
2
can you please elaborate how the cell type proportions were calculated to define niches.
#7
deconvolute
closed
2 years ago
1
Would you mind releasing scripts related to cell cycle score?
#6
wangyiqing50
closed
2 years ago
1
Added snRNA_seq analysis of visium data
#5
KramannLab
opened
3 years ago
0
Added snRNA_seq analysis of visium data
#4
KramannLab
closed
3 years ago
0
add atac-seq footprinting analysis
#3
lzj1769
closed
3 years ago
0
add more scripts
#2
lzj1769
closed
3 years ago
0
add trajectory analysis
#1
lzj1769
closed
3 years ago
0