sandberg-lab Smart-seq3 issues - Githubissues

sandberg-lab / Smart-seq3

Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).

GNU General Public License v3.0

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Assistance required with ss3_isoform.py Script error

#14 Smriti-takara opened 2 months ago
0
The length of i5/i7 index in HCA data

#13 PeggySze closed 1 year ago
4
The difference between stitcher.py and ss3iso.py

#12 lamyankin opened 1 year ago
1
ss3_isoform.py: error: no such option: -Q

#11 Shinichiro03 closed 2 years ago
0
Could not find function "dSample"

#10 parichitran closed 2 years ago
0
New Error - getting Parse error

#9 Kdoganyi closed 2 years ago
9
The filtering has been running for 3 days now, no warning is given but something must be broken

#8 Kdoganyi closed 2 years ago
3
Remove `--quantMode TranscriptomeSAM'` from example YAML config

#7 ghuls closed 3 years ago
1
Find_pattern set up for YAML

#6 roxyisat-rex closed 3 years ago
2
Error while running ss3_isoform.py

#5 kwglam opened 3 years ago
13
a problem about follow your pipeline s3_isoform.py

#4 loverlyday opened 3 years ago
19
About repeating the analysis of Smartseq3.Fibroblasts.NovaSeq

#3 loverlyday closed 3 years ago
13
About repeating the analysis of HEK293T

#2 yewero closed 3 years ago
5
barcode list

#1 ndu-bioinfo closed 4 years ago
1