sanger-pathogens Bio-Tradis issues

sanger-pathogens / Bio-Tradis

A set of tools to analyse the output from TraDIS analyses

https://sanger-pathogens.github.io/Bio-Tradis/

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issues

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conda install提示需要perl-moose

#137 wwhwwxlz opened 1 month ago
1
Problems with bacteria_tradis mapping

#136 bethanyf3 opened 4 months ago
1
Possible bug handling reads with clipping when converting mapped reads to insertion plot

#135 emgemg opened 5 months ago
1
bacteria_tradis tsv extension bug

#134 adriangeerre opened 8 months ago
0
`tradis_merge_plots` cannot find `tradisfind`

#133 cerebis opened 10 months ago
3
how is the insertion index calculated?

#132 mpapange opened 1 year ago
6
EdgeR not working with new R version?

#131 iawarner opened 1 year ago
0
Issues on running BioTraDIS on multiple contigs

#130 Madhuskey1993 opened 1 year ago
1
Essentiality function not working

#129 sbastkowski opened 2 years ago
1
Unable to install biotradis

#128 voonkit opened 2 years ago
0
-mm paramater not working as expected

#127 martinclott opened 3 years ago
1
Update README.md

#126 doomedramen closed 3 years ago
0
tradis_comparison issue

#125 pmireland opened 3 years ago
3
tradis_essentiality.R output a file containing change points?

#124 BenjaminJPerry opened 3 years ago
0
Problem with insertion plots (files longer than they should be)

#123 irilenia opened 3 years ago
9
need to update read end for soft-clipping as well

#122 lbarquist closed 3 years ago
0
fixed bug in handling soft clipping at read start, updated tutorial

#121 lbarquist closed 3 years ago
0
Possible issue with calculation of read start and ends in module Cigar.pm

#120 irilenia closed 3 years ago
2
ftp download link in biotradistutorial.pdf no longer exists

#119 adamdoescode opened 4 years ago
0
add locales to Dockerfile

#118 puethe closed 4 years ago
0
Essentiality analysis code

#117 apredeus closed 4 years ago
4
test failures with samtools v1.10

#116 mr-c opened 4 years ago
1
Update README.md

#115 thanhleviet closed 4 years ago
0
Remove hardcoded path

#114 thanhleviet closed 4 years ago
0
Update bacteria_tradis

#113 thanhleviet closed 4 years ago
0
Fix for libraries in installation and update of conda installation command

#112 sbastkowski closed 4 years ago
0
Removed '--force' for [@Starter]

#111 telatin closed 5 years ago
0
installing biotradis on MacOS

#110 angelovangel closed 5 years ago
4
Update TravisCI tests using Docker

#109 telatin closed 5 years ago
1
Fixed relative path to ./lib problem in binaries using FindBin

#108 telatin closed 5 years ago
0
Add relative path to ./lib via FindBin

#107 telatin closed 5 years ago
0
Add relative path to ./lib via FindBin

#106 telatin closed 5 years ago
0
Add relative path to lib/ via FindBin

#105 telatin closed 5 years ago
0
Add relative path to ./lib via FindBin

#104 telatin closed 5 years ago
0
Add relative path to ./lib via FindBin

#103 telatin closed 5 years ago
0
Fix missing library

#102 telatin closed 5 years ago
0
Add conda badge to README

#101 ssjunnebo closed 5 years ago
0
How to deal with biological replicates - tradis_essentiality.R

#100 subwaystation closed 5 years ago
4
Update README.md

#99 thanhleviet closed 5 years ago
0
Added changelog

#98 ssjunnebo closed 5 years ago
0
Include tests in README

#97 ssjunnebo closed 5 years ago
0
update version for cpan

#96 ssjunnebo closed 5 years ago
0
Add to codecov

#95 ssjunnebo closed 5 years ago
0
Change TryCatch to Try::Tiny

#94 ssjunnebo closed 5 years ago
0
fix typo in badge

#93 ssjunnebo closed 5 years ago
0
Include TOC

#92 ssjunnebo closed 6 years ago
0
621538 docker

#91 ssjunnebo closed 6 years ago
0
621538 docker

#90 ssjunnebo closed 6 years ago
0
include reference genome for cram

#89 ssjunnebo closed 6 years ago
0
Revert "Replace cram file without reads"

#88 ssjunnebo closed 6 years ago
0