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libsbml
LibSBML is a native library for reading, writing and manipulating files and data streams containing the Systems Biology Markup Language (SBML). It offers language bindings for C, C++, C#, Java, JavaScript, MATLAB, Perl, PHP, Python, R and Ruby.
https://sbml.org/software/libsbml
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A hack fix for issue 320, but it works.
#413
luciansmith
closed
1 day ago
0
Fix curve child listOfElements
#412
luciansmith
closed
1 day ago
1
Missing child ListOfCurveSegments for RenderCurve
#411
luciansmith
opened
1 day ago
1
Fix nightly manylinux build
#410
fbergmann
closed
2 days ago
0
R source archive does not compile on windows.
#409
complicatedZ
opened
6 days ago
3
Make libSBML well consumable via FetchContent
#408
starboerg
opened
1 month ago
0
Fixing nightlies
#407
fbergmann
closed
1 month ago
0
fix nightly build
#406
fbergmann
closed
1 month ago
0
Add basic converter for inferring reactions
#405
fbergmann
closed
1 month ago
0
Update GitHub Actions where needed
#404
fbergmann
closed
1 month ago
0
sort test failures
#403
fbergmann
closed
1 month ago
0
issues with ODE -> Reaction converter
#402
fbergmann
opened
1 month ago
0
Pull fixes.
#401
luciansmith
closed
2 months ago
0
At attempt to fix #398
#400
luciansmith
closed
1 day ago
0
Fix behavior of render getAllElements and memory leaks from there and elsewhere.
#399
luciansmith
closed
1 day ago
0
Uninitialized jump in render's Transformation2D::readAttributes
#398
luciansmith
closed
1 day ago
1
SBO Tests yield wrong result (at least in JSON)
#397
Schmoho
closed
2 months ago
1
Add object sid in error messages
#396
matthiaskoenig
opened
2 months ago
2
libsbml claims biomodel 1065 is invalid. I don't think it is?
#395
luciansmith
closed
2 months ago
2
RateRuleConverter crashes on unsupported math
#394
fbergmann
closed
2 months ago
0
Issue 385: flexibility with running strict unit validation
#393
fbergmann
closed
2 months ago
1
Sk/small fixes
#392
skeating
opened
2 months ago
1
#390: add hasPrefix to xmlnode / xmlattributes
#391
fbergmann
closed
3 months ago
0
XMLNode_getPrefix unexpectedly returns NULL when prefix is absent
#390
eltix
closed
3 months ago
3
move checks for library symbol to find module
#389
luciansmith
closed
3 months ago
0
Remove the check for zlib.h.
#388
luciansmith
closed
3 months ago
0
#386: fix compilation of java when using gnumake
#387
fbergmann
closed
3 months ago
0
JavaBindings dont build with gnumake && python 3.12
#386
Schmoho
closed
3 months ago
4
checkConsistencyWithStrictUnits reports Units issues as Errors not Warnings
#385
matthiaskoenig
closed
2 months ago
8
Sk/distrib units
#384
skeating
closed
3 months ago
0
update dependency checks
#383
fbergmann
opened
3 months ago
0
Detect ZLIB using find module
#382
fbergmann
closed
3 months ago
0
Prepare 5.20.4 release
#381
fbergmann
closed
3 months ago
0
Remove all checks for SBML core version when adding package elements.
#380
luciansmith
closed
3 months ago
0
check error messages for `This functionality will be improved in later versions of libSBML.`
#379
fbergmann
opened
4 months ago
1
Unit validation not working on AssignmentRule
#378
matthiaskoenig
closed
3 months ago
3
Assignment cycle optimization
#377
fbergmann
closed
3 months ago
1
XMLNode should have an overload that addopts a child
#376
fbergmann
opened
6 months ago
0
add printf style formatting to Rf_error calls
#375
spotaws
closed
6 months ago
0
Improve the efficiency of the AssignmentCycles::determineAllDependencies() function
#374
eltix
closed
3 months ago
6
Change model failures to slightly more likely mistake.
#373
luciansmith
closed
3 months ago
0
Disable csharp build on nightly macOS runs
#371
fbergmann
closed
6 months ago
0
Replace deprecated unittest.makeSuite()
#370
penguinpee
closed
7 months ago
1
Update README.md
#369
skeating
closed
7 months ago
0
- ensure expat can be found when crosscompiling
#368
fbergmann
closed
7 months ago
1
File 99107-fail-01-06-10102 not actually wrong
#367
luciansmith
opened
8 months ago
1
Typo in the tag name
#372
SolunarNexus
closed
3 months ago
1
Enable CMake user option `BUILD_SHARED_LIB`
#366
Waschina
closed
3 months ago
0
Unit validation with distrib uniform not working
#365
matthiaskoenig
closed
3 months ago
6
Can't install SBML in MATLAB 2023b
#364
Elisshaze
opened
10 months ago
1
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