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sbml-specifications
The specification documents for SBML.
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Fix for #403 in correct branch this time.
#409
luciansmith
closed
3 months ago
0
Fix issue #2: t=0 -> t_i
#408
luciansmith
opened
5 months ago
2
FBC-v3 JIB editorial
#407
matthiaskoenig
closed
7 months ago
0
Finalizing the FBC version 3 specification
#406
bgoli
closed
7 months ago
5
fbc-v3: preparing final version
#405
bgoli
opened
8 months ago
2
FBC PR that adds text and UML for quadratic terms
#404
bgoli
closed
8 months ago
2
FBC: No 'reaction2' in final version of FBC v3
#403
luciansmith
closed
3 months ago
10
Fixes for FBC V3 updates UML
#402
bgoli
closed
9 months ago
0
Fixes for FBC V3
#401
skeating
closed
9 months ago
1
fbc v3: DocumentConventions don't say why things are red
#400
luciansmith
closed
9 months ago
4
fbc v3: xmlns in KeyValuePair UML could have actual URI
#399
luciansmith
closed
8 months ago
1
fbc v3: constraint example could be clearer with semantic IDs
#398
luciansmith
closed
9 months ago
0
FBC l3: ListOfKeyValuePairs should be listed as optional in UML
#397
luciansmith
closed
8 months ago
2
fbc v3: empty lists?
#396
luciansmith
closed
3 months ago
2
fbc-v3: missing references
#395
luciansmith
closed
7 months ago
12
fbc-v3: Add orcid to authors, remove thanking of authors
#394
matthiaskoenig
closed
9 months ago
3
updated FBC v3 spec to RC2 final
#393
bgoli
closed
1 year ago
0
Spatial validation rule 21350 too stringent
#392
luciansmith
closed
1 year ago
3
Dead link to SBML specification on website
#391
shoepfl
closed
1 year ago
4
fbc-v3: Usage practices for key/value pairs
#390
tpfau
closed
9 months ago
0
fbc-v3: Add example for polymer reaction to demonstrate new formula syntax
#389
matthiaskoenig
closed
7 months ago
4
FBC version 3 release candidate 1
#388
bgoli
closed
1 year ago
0
Spatial: clarify/comment in scope about dynamics of spatial objects
#387
matthiaskoenig
opened
2 years ago
0
Spatial: Examples links broken
#386
skeating
closed
2 years ago
1
Spatial: How does this work with simulation of core models.
#385
luciansmith
opened
2 years ago
8
Spatial: Clarify work with other packages
#384
luciansmith
closed
2 years ago
6
Spatial: DiffusionCoefficient should be handled analogously to AdvectionCoefficient.
#383
luciansmith
opened
2 years ago
6
Spatial: Remove 'Robin' boundary conditions?
#382
luciansmith
closed
2 years ago
8
Spatial: Address SBML Editor comments
#381
luciansmith
closed
2 years ago
23
Address Jim's comments on spatial spec.
#380
luciansmith
closed
2 years ago
0
fbc-v3: UserDefinedConstraintComponent coefficient defined as double in UML
#379
matthiaskoenig
closed
2 years ago
7
fbc-v3: word missing in sentence about UserDefinedConstraint
#378
matthiaskoenig
closed
1 year ago
1
Put 'difference' back in
#377
luciansmith
closed
2 years ago
1
Allow lower-dimensional AnalyticVolumes
#376
luciansmith
closed
2 years ago
2
Allow 0D Domains.
#375
luciansmith
closed
2 years ago
0
Spatial: Clarify initial conditions for single domain
#374
luciansmith
closed
2 years ago
1
No unitSize on CoordinateComponent
#373
luciansmith
opened
2 years ago
1
Spatial: typo in Robin description
#372
luciansmith
closed
2 years ago
0
Spatial: boundaryCondition vs. BoundaryCondition
#371
luciansmith
closed
2 years ago
1
fbc-v3: required attribute `variableType` missing in `fluxObjective` examples
#370
matthiaskoenig
closed
1 year ago
2
The RNG misses the simple types
#369
matthiaskoenig
opened
2 years ago
1
Change event language from 't=0' to 't_i'.
#2
luciansmith
opened
3 years ago
10
Extensive/Intensive reversed
#368
sbmlsecretary
opened
3 years ago
1
SBML L3V2 units UML is incorrect (arrow direction)
#367
sbmlsecretary
opened
3 years ago
1
Import specification content from sourceforge
#1
matthiaskoenig
closed
2 years ago
4
qual: Input Species not in FunctionTerm
#366
sbmlsecretary
opened
4 years ago
1
Update identifiers.org URLs
#365
sbmlsecretary
opened
4 years ago
0
Suggested change to SBML multi-compartment model example
#364
sbmlsecretary
opened
4 years ago
3
Possible typo in the value of the "persistent" attribute
#363
sbmlsecretary
opened
4 years ago
2
spatial spec example problematic
#362
sbmlsecretary
closed
2 years ago
2
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