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sccn / NEMAR-pipeline

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Missing data makes the pipeline crash #83

Closed arnodelorme closed 1 month ago

arnodelorme commented 2 months ago

Dataset number ds002799 has subject 372 sess-preop missing an ieeg folder. However, it should not crash for that reason.

arnodelorme commented 1 month ago

@dungscout96 would you mind to look at that? There is a subject that has some data missing in the eeg modality. This makes the importer crash, but we would want it to ignore that session or subject.

arnodelorme commented 1 month ago

See also /expanse/projects/nemar/openneuro/ds004738/sub-abtpc/ses-220616/meg/sub-abtpc_ses-220616_task-dip13_acq-StimOff_meg.fif

This data is empty, which cases the pipeline to crash.

arnodelorme commented 1 month ago

See https://github.com/sccn/NEMAR-pipeline/issues/84 which should fix the issue

dungscout96 commented 1 month ago

Implemented missing files handler. ds002799 doesn't have any data. TODO https://github.com/sccn/NEMAR-pipeline/issues/90