NEMAR-pipeline
Code for NEMAR pipeline to generate visualization and data quality report. Refactored https://github.com/sccn/app-test-NEMAR
Using your own function
- Make sure you have an Expanse
- Clone the repository
There are 2 types of pipelines
- Pipelines that process single EEG datasets
- Pipelines that process an entire BIDS repo
process_all_custom_pipelines
- Take a BIDS dataset
- Take a function name to process the data
Allow to use the processed directory instead of the raw data folder
3 modes
- Process single EEG dataset
- Process all EEG datasets of a subject
- Process a STUDY
- Process the BIDS folder
The function should write a JSON or SVG file into the same folder as the EEG file or the same folder as the derivative BIDS repo
options - options to the function
Parameters
Inclusion to the NEMAR website
- Send the name of the file to Dung
- If a plot, send the title
- associated titled
- file name
- If a JSON file, for each entry send. No array allowed.