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schneebergerlab
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findGSE
findGSE is a tool for estimating size of (heterozygous diploid or homozygous) genomes by fitting k-mer frequencies iteratively with a skew normal distribution model.
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How to interpretate results?
#11
xiekunwhy
opened
5 months ago
14
Error type : "Error in xtmp >= 1 && xtmp <= end_for_mean : 'length = 61065' in coercion to 'logical(1)'"
#10
simleopold
closed
7 months ago
0
Error type : "Error in xtmp >= 1 && xtmp <= end_for_mean : 'length = 61065' in coercion to 'logical(1)'"
#9
simleopold
opened
7 months ago
23
inconsistent estimations in heterozygous plant genomes
#8
dcopetti
opened
2 years ago
2
Can findGSE use third generation sequencing reads？
#7
CSU-KangHu
closed
7 months ago
1
Is findGSE sensitive to PCR repeats and organelle genomes?
#6
Caoyu819
closed
3 years ago
1
several issues: Warning: data does not follow assumed distribution anymore at itr 1 + Error in singlestart:singleend : NA/NaN argument
#5
CornilleAmandine
closed
7 months ago
1
Unexpected size of k
#4
stefanerb89
closed
7 months ago
1
Iterative fitting stops at iter 1, expected: 10
#3
AllisonStander
closed
4 years ago
1
Measure the difference between the real curve and fitting curve
#2
yanboANU
closed
4 years ago
1
offset_count error
#1
whc2
closed
5 years ago
2