scientist-softserv / atla-hyku

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Hyku, the Hydra-in-a-Box Repository Application

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Docs: Documentation Contribution Guidelines Apache 2.0 License

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Table of Contents


Running the stack

For development / testing with Docker

Dory

On OS X or Linux we recommend running Dory. It acts as a proxy allowing you to access domains locally such as hyku.test or tenant.hyku.test, making multitenant development more straightforward and prevents the need to bind ports locally. Be sure to adjust your ~/.dory.yml file to support the .test tld. You can still run in development via docker with out Dory. To do so, copy docker-compose.override-nodory.yml to docker-compose.override.yml before starting doing docker-compose up. You can then see the application at the loopback domain 'lvh.me:3000'.

gem install dory
dory up

Basic steps

docker-compose up web

This command starts the whole stack in individual containers allowing Rails to be started or stopped independent of the other services. Once that starts (you'll see the line Passenger core running in multi-application mode. to indicate a successful boot), you can view your app in a web browser with at either hyku.test or localhost:3000 (see above). When done docker-compose stop shuts down everything.

Tests in Docker

The full spec suite can be run in docker locally. There are several ways to do this, but one way is to run the following:

docker-compose exec web rake

With out Docker

Please note that this is unused by most contributors at this point and will likely become unsupported in a future release of Hyku unless someone in the community steps up to maintain it.

For development

solr_wrapper
fcrepo_wrapper
postgres -D ./db/postgres
redis-server /usr/local/etc/redis.conf
bin/setup
DISABLE_REDIS_CLUSTER=true bundle exec sidekiq
DISABLE_REDIS_CLUSTER=true bundle exec rails server -b 0.0.0.0

For testing

See the Hyku Development Guide for how to run tests.

Working with Translations

You can log all of the I18n lookups to the Rails logger by setting the I18N_DEBUG environment variable to true. This will add a lot of chatter to the Rails logger (but can be very helpful to zero in on what I18n key you should or could use).

$ I18N_DEBUG=true bin/rails server

On AWS

AWS CloudFormation templates for the Hyku stack are available in a separate repository:

https://github.com/hybox/aws

With Docker

We distribute two docker-compose.yml configuration files. The first is set up for development / running the specs. The other, docker-compose.production.yml is for running the Hyku stack in a production setting. . Once you have docker installed and running, launch the stack using e.g.:

docker-compose up -d web

Note: You may need to add your user to the "docker" group.

newgrp docker

With Vagrant

The samvera-vagrant project provides another simple way to get started "kicking the tires" of Hyku (and Hyrax), making it easy and quick to spin up Hyku. (Note that this is not for production or production-like installations.) It requires VirtualBox and Vagrant.

With Kubernetes

Hyku relies on the helm charts provided by Hyrax. See Deployment Info for more information. We also provide a basic helm deployment script. Hyku currently needs some additional volumes and ENV vars over the base Hyrax. See (ops/review-deploy.tmpl.yaml) for an example of what that might look like.

Single Tenant Mode

Much of the default configuration in Hyku is set up to use multi-tenant mode. This default mode allows Hyku users to run the equivielent of multiple Hyrax installs on a single set of resources. However, sometimes the subdomain splitting multi-headed complexity is simply not needed. If this is the case, then single tenant mode is for you. Single tenant mode will not show the tenant sign up page, or any of the tenant management screens. Instead it shows a single Samvera instance at what ever domain is pointed at the application.

To enable single tenant, set HYKU_MULTITENANT=false in your docker-compose.yml and docker-compose.production.yml configs. After changinig this setting, run rails db:seed to prepopulate the single tenant.

In single tenant mode, both the application root (eg. localhost, or hyku.test) and the tenant url single.* (eg. single.hyku.test) will load the tenant. Override the root host by setting HYKU_ROOT_HOST`.

To change from single- to multi-tenant mode, change the multitenancy/enabled flag to true and restart the application. Change the 'single' tenant account cname in the Accounts edit interface to the correct hostname.

Switching accounts

There are three recommend ways to switch your current session from one account to another by using:

switch!(Account.first)
# or
switch!('my.site.com')
# or
switch!('myaccount')

Analytics Feature

Hyku currently only supports the configuration of one Google Analytics account for the basic functionality of this feature. Hyku currently only support Google Analytics with the Universal Analytics property for this feature.

Note: Google has announced they will stop processing data using the Universal Analytics property on July 1, 2023 or July 1, 2024 for Analytics 360 properties.

To enable analytics tracking and reporting features within Hyku, please follow the directions below.

Setup a Google Analytics Account

Set the Environment Variables

In Hyku there are a few areas to set the environment variables needed for each of your environments development/staging/prodeuction/etc.

analytics:
  google:
    analytics_id: <%= ENV['GOOGLE_ANALYTICS_ID'] %>
    app_name: <%= ENV['GOOGLE_OAUTH_APP_NAME'] %>
    app_version: <%= ENV['GOOGLE_OAUTH_APP_VERSION'] %>
    privkey_path: <%= ENV['GOOGLE_OAUTH_PRIVATE_KEY_PATH'] %>
    privkey_secret: <%= ENV['GOOGLE_OAUTH_PRIVATE_KEY_SECRET'] %>
    client_email: <%= ENV['GOOGLE_OAUTH_CLIENT_EMAIL'] %>
##START## Enable Google Analytics
# Uncomment to enable and configure Google Analytics, see README for instructions.
HYRAX_ANALYTICS=true
GOOGLE_ANALYTICS_ID=UA-123456-12
GOOGLE_OAUTH_APP_NAME=hyku-demo
GOOGLE_OAUTH_APP_VERSION=1.0
GOOGLE_OAUTH_PRIVATE_KEY_SECRET=not-a-secret
GOOGLE_OAUTH_PRIVATE_KEY_PATH=prod-cred.p12
GOOGLE_OAUTH_CLIENT_EMAIL=set-me@email.com

# AND comment this out
# HYRAX_ANALYTICS=false
##END## Enable Google Analytics
  - name: GOOGLE_ANALYTICS_ID
    value: $GOOGLE_ANALYTICS_ID # Set in GitHub's Environment Secrets
  - name: GOOGLE_OAUTH_APP_NAME
    value: hyku-demo
  - name: GOOGLE_OAUTH_APP_VERSION
    value: '1.0'
  - name: GOOGLE_OAUTH_PRIVATE_KEY_SECRET
    value: $GOOGLE_OAUTH_PRIVATE_KEY_SECRET # Set in GitHub's Environment Secrets
  - name: GOOGLE_OAUTH_PRIVATE_KEY_PATH
    value: prod-cred.p12 # The p12 file is in root and named `prod-cred.p12`
  - name: GOOGLE_OAUTH_PRIVATE_KEY_VALUE
    value: $GOOGLE_OAUTH_PRIVATE_KEY_VALUE # Set in GitHub's Environment Secrets
  - name: GOOGLE_OAUTH_CLIENT_EMAIL
    value: set-me@email.com
  - name: HYRAX_ANALYTICS
    value: 'true'

To get the GOOGLE_OAUTH_PRIVATE_KEY_VALUE value to set the variable in GitHub's Environment Secrets, you need the path to the p12 file you got from setting up your Google Service Account and run the following in your console locally.

base64 -i path/to/file.p12 | pbcopy

Once you run this script the value is on your local computers clipboard. You will need to paste this into GitHubs Environment Secrets or however you/your organization are handling secrets.

Environment Variables

Name Description Default Development or Test Only
CHROME_HOSTNAME specifies the chromium host for feature specs chrome yes
DB_ADAPTER which Rails database adapter, mapped in to config/database.yml. Common values are postgresql, mysql2, jdbc, nulldb postgresql no
DB_HOST host name for the database db no
DB_NAME name of database on database host hyku no
DB_PASSWORD password for connecting to database no
DB_PORT Port for database connections 5432 no
DB_TEST_NAME name of database on database host for tests to run against. Should be different than the development database name or your tests will clobber your dev set up hyku_test yes
DB_USER username for the database connection postgres no
FCREPO_BASE_PATH Fedora root path /hykudemo no
FCREPO_DEV_BASE_PATH Fedora root path used for dev instance /dev yes
FCREPO_DEVELOPMENT_PORT Port used for fedora dev instance 8984 yes
FCREPO_HOST host name for the fedora repo fcrepo no
FCREPO_PORT port for the fedora repo 8080 no
FCREPO_REST_PATH Fedora REST endpoint rest no
FCREPO_STAGING_BASE_PATH Fedora root path used for dev instance /staging no
FCREPO_TEST_BASE_PATH Fedora root path used for test instance /test yes
FCREPO_TEST_PORT Test port for the fedora repo 8986 yes
GOOGLE_ANALYTICS_ID The Google Analytics account id. Disabled if not set - no
GOOGLE_OAUTH_APP_NAME The name of the application. - no
GOOGLE_OAUTH_APP_VERSION The version of application. - no
GOOGLE_OAUTH_PRIVATE_KEY_SECRET The secret provided by Google when you created the key. - no
GOOGLE_OAUTH_PRIVATE_KEY_PATH The full path to your p12, key file. - no
GOOGLE_OAUTH_PRIVATE_KEY_VALUE The value of the p12 file with base64 encryption, only set on deployment as that is how we get the p12 file on the server (see bin/web & bin/worker files) - no
GOOGLE_OAUTH_CLIENT_EMAIL OAuth Client email address. set-me@email.com no
HYKU_ADMIN_HOST URL of the admin / proprietor host in a multitenant environment hyku.test no
HYKU_ADMIN_ONLY_TENANT_CREATION Restrict signing up a new tenant to the admin false no
HYKU_ALLOW_SIGNUP Can users register themselves on a given Tenant true no
HYKU_ASSET_HOST Host name of the asset server - no
HYKU_BULKRAX_ENABLED Is the Bulkrax gem enabled true no
HYKU_BULKRAX_VALIDATIONS Unused, pending feature addition by Ubiquity - no
HYKU_CACHE_API Use Redis instead of disk for caching false no
HYKU_CACHE_ROOT Directory of file cache (if CACHE_API is false) /app/samvera/file_cache no
HYKU_CONTACT_EMAIL Email address used for the FROM field when the contact form is submitted change-me-in-settings@example.com no
HYKU_CONTACT_EMAIL_TO Email addresses (comma separated) that receive contact form submissions change-me-in-settings@example.com no
HYKU_DEFAULT_HOST The host name pattern each tenant will respond to by default. %{tenant} is substituted for the tenants name. "%{tenant}.#{admin_host}" no
HYKU_DOI_READER Does the work new / edit form allow reading in a DOI from Datacite? false no
HYKU_DOI_WRITER Does saving or updating a work write to Datacite once the work is approved false no
HYKU_ELASTIC_JOBS Use AWS Elastic jobs for background jobs false no
HYKU_EMAIL_FORMAT Validate if user emails match a basic email regexp (currently /@\S*.\S*/) false no
HYKU_EMAIL_SUBJECT_PREFIX String to put in front of system email subjects - no
HYKU_ENABLE_OAI_METADATA Not used. Placeholder for upcoming OAI feature. false no
HYKU_FILE_ACL Set Unix ACLs on file creation. Set to false if using Azure cloud or another network file system that does not allow setting permissions on files. true no
HYKU_FILE_SIZE_LIMIT How big a file do you want to accept in the work upload? 5242880 (5 MB) no
HYKU_GEONAMES_USERNAME Username used for Geonames connections by the application '' no
HYKU_GOOGLE_SCHOLARLY_WORK_TYPES List of work types which should be presented to Google Scholar for indexing. Comma separated WorkType list - no
HYKU_GTM_ID If set, enable Google Tag manager with this id. - no
HYKU_LOCALE_NAME Not used. Placeholder for upcoming Ubiquity feature en no
HYKU_MONTHLY_EMAIL_LIST Not used. Placeholder for upcoming Ubiquity feature en no
HYKU_MULTITENANT Set application up for multitenantcy, or use the single tenant version. false no
HYKU_OAI_ADMIN_EMAIL OAI endpoint contact address changeme@example.com no
HYKU_OAI_PREFIX OAI namespace metadata prefix oai:hyku no
HYKU_OAI_SAMPLE_IDENTIFIER OAI example of what an identify might look like 806bbc5e-8ebe-468c-a188-b7c14fbe34df no
HYKU_ROOT_HOST What is the very base url that default subdomains should be tacked on to? hyku.test no
HYKU_S3_BUCKET If set basic uploads for things like branding images will be sent to S3 - no
HYKU_SHARED_LOGIN Not used. Placeholder for upcoming Ubiquity feature en no
HYKU_SMTP_SETTINGS String representing a hash of options for tenant specific SMTP defaults. Can be any of from user_name password address domain port authentication enable_starttls_auto - no
HYKU_SOLR_COLLECTION_OPTIONS Overrides of specific collection options for Solr. {async: nil, auto_add_replicas: nil, collection: { config_name: ENV.fetch('SOLR_CONFIGSET_NAME', 'hyku') }, create_node_set: nil, max_shards_per_node: nil, num_shards: 1, replication_factor: nil, router: { name: nil, field: nil }, rule: nil, shards: nil, snitch: nil} no
HYKU_SSL_CONFIGURED Force SSL on page loads and IIIF manifest links false no
HYKU_WEEKLY_EMAIL_LIST Not used. Placeholder for upcoming Ubiquity feature en no
HYKU_YEARLY_EMAIL_LIST Not used. Placeholder for upcoming Ubiquity feature en no
HYRAX_ACTIVE_JOB_QUEUE Which Rails background job runner should be used? sidekiq no
HYRAX_FITS_PATH Where is fits.sh installed on the system. Will try the PATH if not set. /app/fits/fits.sh no
HYRAX_REDIS_NAMESPACE What namespace should the application use by default hyrax no
I18N_DEBUG See [Working with Translations] above false yes
INITIAL_ADMIN_EMAIL Admin email used by database seeds. admin@example.com no
INITIAL_ADMIN_PASSWORD Admin password used by database seeds. Be sure to change in production. testing123 no
IN_DOCKER Used specs to know if we are running inside a container or not. Set to true if in K8S regardless of Docker vs ContainerD false yes
LD_LIBRARY_PATH Path used for fits /app/fits/tools/mediainfo/linux no
NEGATIVE_CAPTCHA_SECRET A secret value you set for the appliations negative_captcha to work. default-value-change-me no
RAILS_ENV https://guides.rubyonrails.org/configuring.html#creating-rails-environments development no
RAILS_LOG_TO_STDOUT Redirect all logging to stdout true no
RAILS_MAX_THREADS Number of threads to use in puma or sidekiq 5 no
REDIS_HOST Host location of redis redis no
REDIS_PASSWORD Password for redis, optional - no
REDIS_URL Optional explicit redis url, build from host/passsword if not specified redis://:staging@redis:6397/ no
SECRET_KEY_BASE Used by Rails to secure sessions, should be a 128 character hex - no
SMTP_ADDRESS Address of the smtp endpoint for sending email - no
SMTP_DOMAIN Domain for sending email - no
SMTP_PASSWORD Password for email sending - no
SMTP_PORT Port for email sending - no
SMTP_USER_NAME Username for the email connection - no
SOLR_ADMIN_PASSWORD Solr requires a user/password when accessing the collections API (which we use to create and manage solr collections and aliases) admin no
SOLR_ADMIN_USER Solr requires a user/password when accessing the collections API (which we use to create and manage solr collections and aliases) admin no
SOLR_COLLECTION_NAME Name of the Solr collection used by non-tenant search. This is required by Hyrax, but is currently unused by Hyku hydra-development no
SOLR_CONFIGSET_NAME Name of the Solr configset to use when creating new Solr collections hyku no
SOLR_HOST Host for the Solr connection solr no
SOLR_PORT Solr port 8983 no
SOLR_URL URL for the Solr connection http://admin:admin@solr:8983/solr/ no
WEB_CONCURRENCY Number of processes to run in either puma or sidekiq 2 no

Development Dependencies

Postgres

Hyku supports multitenancy using the apartment gem. apartment works best with a postgres database.

Importing

Bulkrax:

Bulkrax is enabled by default and CSV, OAI and XML importers can be used in the admin dashboard or through the command line API. More info about configuring and using bulkrax can be found here

Commandline Importers

Importing from CSV and PURL directly can be done via Bulkrax and the built in code in Hyku is slated for deletion in the next release.

Compatibility

Product Owner

orangewolf

Help

The Samvera community is here to help. Please see our support guide.

Acknowledgments

This software was developed by the Hydra-in-a-Box Project (DPLA, DuraSpace, and Stanford University) under a grant from IMLS.

This software is brought to you by the Samvera community. Learn more at the Samvera website.

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