Migrate tracking modules to scilpy 2.0.0 + nf-test.

[arnaudbore]

Type of improvement

If submitting a new module or fixing a bug, please use the appropriate template.

• [ ] Documentation
• [ ] Development tools (e.g. linter, formatter, etc.)
• [ ] Development container
• [x] Global update (please specify)
• [ ] Other (please specify)

Describe your improvement

Migrate trackings modules to scilpy 2.0.0 + nf-test.

Checklist before requesting a review

• [x] Ensure the syntax is correct (EditorConfig and Prettier must pass)
• [x] Run the test suites if your changes affect any module
• [ ] Regenerate the Poetry lock file if you have updated the dependencies
• [ ] Ensure the documentation is up-to-date

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