scverse anndata issues - Githubissues

scverse / anndata

Annotated data.

http://anndata.readthedocs.io

BSD 3-Clause "New" or "Revised" License

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issues

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anndata initializer does not verify indices match on layers

#1769 amcpherson opened 2 days ago
1
(chore): adopt scientific python deprecation schedule

#1768 ilan-gold opened 2 days ago
0
(chore): tighten `spmatrix` usage

#1767 ilan-gold opened 3 days ago
3
(chore): remove `anndata.read`

#1766 ilan-gold opened 3 days ago
1
(feat): restrict release branches in automation

#1765 ilan-gold opened 3 days ago
1
Backport PR #1762: Fix towncrier automation PR body

#1764 meeseeksmachine closed 3 days ago
1
Backport PR #1761 on branch main ((chore): generate 0.11.1 release notes)

#1763 meeseeksmachine closed 3 days ago
1
Fix towncrier automation PR body

#1762 flying-sheep closed 3 days ago
1
(chore): generate 0.11.1 release notes

#1761 ilan-gold closed 5 days ago
3
Revert "(chore): generate 0.11.1 release notes"

#1760 ilan-gold closed 5 days ago
1
(chore): generate 0.11.1 release notes

#1759 ilan-gold closed 5 days ago
1
Handle != in min-deps script

#1758 flying-sheep opened 5 days ago
2
Backport PR #1756 on branch 0.11.x ([pre-commit.ci] pre-commit autoupdate)

#1757 meeseeksmachine closed 5 days ago
1
[pre-commit.ci] pre-commit autoupdate

#1756 pre-commit-ci[bot] closed 5 days ago
1
Backport PR #1754 on branch 0.11.x ((fix): resolve cupy import error on `cupy-cuda12x<0.13`)

#1755 meeseeksmachine closed 6 days ago
1
(fix): resolve cupy import error on `cupy-cuda12x<0.13`

#1754 ilan-gold closed 6 days ago
1
Backport PR #1752 on branch 0.11.x (Merge 0.11 docs with rcs)

#1753 meeseeksmachine closed 6 days ago
1
Merge 0.11 docs with rcs

#1752 flying-sheep closed 6 days ago
1
Backport PR #1745 on branch 0.11.x ((chore): unbound dask)

#1751 meeseeksmachine closed 6 days ago
1
Backport PR #1743 on branch 0.11.x ((fix): lazy chunking respects -1)

#1750 meeseeksmachine closed 6 days ago
1
anndata version 0.11.0 throws ImportError in Google Colab

#1749 lauraluebbert closed 6 days ago
2
Backport PR #1747 on branch 0.11.x (Add PYI lints)

#1748 meeseeksmachine closed 1 week ago
1
Add PYI lints

#1747 flying-sheep closed 1 week ago
1
(fix): raise error on non-integer floating types in iterables

#1746 ilan-gold opened 1 week ago
1
(chore): unbound dask

#1745 ilan-gold closed 6 days ago
1
(fix): cache arrays in `BaseCompressedSparseDataset`

#1744 ilan-gold opened 1 week ago
4
(fix): lazy chunking respects -1

#1743 ilan-gold closed 1 week ago
1
(chore): generate 0.11.0 release notes

#1742 ilan-gold closed 1 week ago
1
Revert "Backport PR #1626: (chore): automation of towncrier release process (+ other towncrier automation fixes)"

#1741 ilan-gold closed 1 week ago
1
(chore): generate 0.10.10 release notes

#1740 ilan-gold closed 1 week ago
0
Backport PR #1626: (chore): automation of towncrier release process (+ other towncrier automation fixes)

#1739 ilan-gold closed 1 week ago
1
Backport PR #1736 on branch 0.10.x (Fix saving of AwkwardArrayView)

#1738 meeseeksmachine closed 1 week ago
1
Backport PR #1733 on branch 0.10.x ([pre-commit.ci] pre-commit autoupdate)

#1737 meeseeksmachine closed 1 week ago
0
Fix saving of AwkwardArrayView

#1736 grst closed 1 week ago
1
Unexpected Behavior: AnnData Allows Indexing with Float Arrays Without Error

#1735 yubin-ai opened 2 weeks ago
5
Backport PR #1729: (feat): support ellipsis indexing

#1734 ilan-gold closed 2 weeks ago
1
[pre-commit.ci] pre-commit autoupdate

#1733 pre-commit-ci[bot] closed 1 week ago
1
Backport PR #1730 on branch 0.10.x (Fix GH actions benchmark run)

#1732 meeseeksmachine closed 3 weeks ago
2
Add support for `sparse` arrays (pydata) to .varp and .obsp fields

#1731 jkobject opened 3 weeks ago
5
Fix GH actions benchmark run

#1730 flying-sheep closed 3 weeks ago
2
(feat): support ellipsis indexing

#1729 ilan-gold closed 2 weeks ago
5
Backport PR #1705 on branch 0.10.x ([pre-commit.ci] pre-commit autoupdate)

#1728 meeseeksmachine closed 3 weeks ago
0
Backport PR #1725: remove label in ci

#1727 flying-sheep closed 3 weeks ago
1
(feat): support for `zarr-python>=3.0.0b0`

#1726 ilan-gold opened 3 weeks ago
1
remove label in ci

#1725 Intron7 closed 3 weeks ago
2
Keep .X when setting filename to None

#1724 eroell opened 3 weeks ago
3
.X is lost when setting anndata.filename to None

#1723 eroell opened 3 weeks ago
1
(chore): add docstring example for `read_elem_as_dask`

#1722 ilan-gold closed 3 weeks ago
1
Awkward array "view" attribute does not get removed on save.

#1721 grst closed 1 week ago
0
Fix docs links

#1720 flying-sheep closed 1 month ago
1