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anndata
Annotated data.
http://anndata.readthedocs.io
BSD 3-Clause "New" or "Revised" License
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(chore): clean up use of `spmatrix` and `sparray`
#1649
ilan-gold
opened
3 weeks ago
0
(chore): add `Index` type to `__getitem__` for sparse dataset
#1648
ilan-gold
closed
1 week ago
3
(fix): submodule warnings
#1647
ilan-gold
closed
3 weeks ago
1
(fix): use `_` as identifier internally, keep public name for datasets
#1646
ilan-gold
closed
3 weeks ago
2
add `.abc` and `.typing` modules
#1645
flying-sheep
closed
3 weeks ago
9
Reorder IO docs
#1644
flying-sheep
closed
3 weeks ago
1
(chore): `RWAble` → `AxisStorable`, `InMemoryElem` → `RWAble`
#1643
ilan-gold
closed
3 weeks ago
3
(chore): export `sparse_dataset` from the core
#1642
ilan-gold
closed
3 weeks ago
1
(chore): add docstring for `InMemoryElem`
#1641
ilan-gold
closed
3 weeks ago
1
Backport PR #1639 on branch 0.10.x ([pre-commit.ci] pre-commit autoupdate)
#1640
meeseeksmachine
closed
3 weeks ago
1
[pre-commit.ci] pre-commit autoupdate
#1639
pre-commit-ci[bot]
closed
3 weeks ago
1
Additional fields in AnnData h5ad and zarr files
#1638
colganwi
closed
3 weeks ago
3
(chore): ensure views of anndata produce distinguishable view classes
#1637
ilan-gold
opened
3 weeks ago
2
Backport PR #1627 on branch 0.10.x (Add hatch-test env customization)
#1636
meeseeksmachine
closed
3 weeks ago
0
(fix): ensure all indexing methods return correct format on backed sparse
#1635
ilan-gold
closed
3 weeks ago
1
0.11 API
#1634
flying-sheep
closed
3 weeks ago
9
(feat): allow reading of `scipy.sparse.cs{c,r}_array`
#1633
ilan-gold
closed
3 weeks ago
1
Backport PR #1616 on branch 0.10.x ((fix): correct typing of AnnData.X)
#1632
flying-sheep
closed
1 month ago
1
(refactor): `should`->`shall` in `settings`
#1631
ilan-gold
closed
1 month ago
1
`should` should be `must` in `settings`?
#1630
ilan-gold
closed
1 month ago
1
Backport PR #1625 on branch 0.10.x (Run towncrier when building docs)
#1629
flying-sheep
closed
1 month ago
1
Trigger CI Jobs in other Core Repos
#1628
ilan-gold
opened
1 month ago
2
Add hatch-test env customization
#1627
flying-sheep
closed
3 weeks ago
1
(chore): automation of towncrier release process
#1626
ilan-gold
closed
1 month ago
5
Run towncrier when building docs
#1625
flying-sheep
closed
1 month ago
1
Chunked writing of h5py.Dataset and zarr.Array
#1624
ivirshup
opened
1 month ago
1
Writing a h5py.Dataset loads the whole thing into memory
#1623
ivirshup
opened
1 month ago
1
(dev): Validate `towncrier` fragments.
#1622
ilan-gold
closed
1 month ago
0
(chore): 0.10.9 release notes
#1621
ilan-gold
closed
1 month ago
1
(dev): Automation for cherry-picking release notes to `main` from `0.X.X` branch
#1620
ilan-gold
closed
1 month ago
2
(chore): prepare release notes
#1619
ilan-gold
closed
1 month ago
1
Auto backport of pr 1596 on 0.10.x
#1618
ilan-gold
closed
1 month ago
1
Adding multiple "visits" (clinical data) to a single .obs
#1617
Rafael-Silva-Oliveira
opened
1 month ago
0
(fix): correct typing of `AnnData.X`
#1616
ilan-gold
closed
1 month ago
6
Backport PR #1612 on branch 0.10.x ((fix): use correct implementation of `StorageType` and resolve name conflict)
#1615
meeseeksmachine
closed
1 month ago
1
Backport PR #1610 on branch 0.10.x ([pre-commit.ci] pre-commit autoupdate)
#1614
meeseeksmachine
closed
1 month ago
1
Backport PR #1604 on branch 0.10.x ((feat): use towncrier for changelog automations)
#1613
flying-sheep
closed
1 month ago
1
(fix): use correct implementation of `StorageType` and resolve name conflict
#1612
ilan-gold
closed
1 month ago
1
(chore): v0.11 fragments
#1611
ilan-gold
closed
1 month ago
2
[pre-commit.ci] pre-commit autoupdate
#1610
pre-commit-ci[bot]
closed
1 month ago
1
Backport PR #1589: (fix): disallow using dataframes with multi index columns
#1609
ilan-gold
closed
1 month ago
1
(fix): clarify public backed sparse docstring/api
#1608
ilan-gold
closed
1 month ago
3
H5ad converts string/object to categorical when saving and reading
#1607
wangjiawen2013
closed
1 month ago
2
Backport PR #1605 on branch 0.10.x (Fix heading anchors in relnotes)
#1606
meeseeksmachine
closed
1 month ago
1
Fix heading anchors in relnotes
#1605
flying-sheep
closed
1 month ago
1
(feat): use `towncrier` for changelog automations
#1604
ilan-gold
closed
1 month ago
9
Backport PR #1601 on branch 0.10.x ([pre-commit.ci] pre-commit autoupdate)
#1603
flying-sheep
closed
1 month ago
0
Add parameter for more resilient `concat_on_disk`
#1602
DingWB
opened
1 month ago
4
[pre-commit.ci] pre-commit autoupdate
#1601
pre-commit-ci[bot]
closed
1 month ago
1
ad.experimental.concat_on_disk fills with zeros some obs when concatenating
#1600
sdettle
closed
1 month ago
0
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