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anndataR
AnnData interoperability in R
https://anndatar.data-intuitive.com
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[feature request] seurat to anndata
#187
Liripo
opened
3 hours ago
1
Bump JamesIves/github-pages-deploy-action from 4.6.3 to 4.6.8
#186
dependabot[bot]
opened
1 week ago
1
Bump JamesIves/github-pages-deploy-action from 4.6.3 to 4.6.6
#185
dependabot[bot]
closed
1 week ago
1
Initialization of AnnData object fails from named matrix
#184
pakiessling
opened
2 weeks ago
0
wip new seurat conversion
#183
rcannood
opened
3 weeks ago
0
Bump JamesIves/github-pages-deploy-action from 4.6.3 to 4.6.4
#182
dependabot[bot]
closed
2 weeks ago
1
update actions
#181
rcannood
closed
1 month ago
0
Tidy user interface #2
#180
rcannood
closed
1 month ago
0
Bump actions/cache from 3 to 4
#179
dependabot[bot]
closed
1 month ago
1
Bump actions/checkout from 3 to 4
#178
dependabot[bot]
closed
1 month ago
1
Bump JamesIves/github-pages-deploy-action from 4.4.1 to 4.6.3
#177
dependabot[bot]
closed
1 month ago
1
add dependabot to the repo
#176
rcannood
closed
1 month ago
0
hdf5r writes boolean vectors as H5T_STD_U8LE, but h5py as H5T_STD_I8LE
#175
rcannood
opened
2 months ago
0
bump version requirements for reticulate and rhdf5
#174
rcannood
closed
1 month ago
0
Create a list of known incompatibilities
#173
rcannood
opened
3 months ago
0
`var_names`/`obs_names` as fixed-size types
#172
rcannood
opened
3 months ago
1
Make rownames part of obs and var
#171
rcannood
closed
3 months ago
3
Generate Python based anndata testfiles
#170
LouiseDck
opened
3 months ago
3
switch from rhdf5 to hdf5r
#169
rcannood
closed
2 months ago
4
Hdf5r rownames rework
#166
rcannood
closed
3 months ago
3
Feature Request: Increase flexibility of `to_Seurat`
#165
JohnMMa
opened
8 months ago
0
Error accessing `X` in `HDF5AnnData` when empty
#164
lazappi
opened
10 months ago
0
Dim reduc
#162
bschilder
opened
10 months ago
0
Version update
#161
rcannood
closed
10 months ago
0
allow h5 files that have already been opened with rhdf5::H5Fopen
#160
rcannood
closed
1 month ago
1
Tidy user interface
#159
lazappi
closed
1 month ago
10
Version update
#158
bschilder
closed
10 months ago
2
Tell RStudio to strip trailing whitespace
#157
lazappi
closed
10 months ago
0
Clean file when writing H5AD
#156
lazappi
opened
10 months ago
0
Fixes to `write_h5ad_categorical()`
#155
lazappi
closed
3 months ago
12
Write HDF5 categoricals correctly using attributes
#154
lazappi
closed
3 months ago
0
Fix CI
#153
rcannood
closed
10 months ago
0
export `generate_dataset()` function
#152
rcannood
closed
10 months ago
0
Update GitHub Actions
#151
rcannood
closed
10 months ago
0
re-enable uns roundtrip test with nested list
#150
rcannood
opened
10 months ago
0
re-enable uns roundtrip tests with logicals and factors (vectors and scalars)
#149
rcannood
opened
10 months ago
0
re-enable uns roundtrip tests with matrices
#148
rcannood
opened
10 months ago
0
re-enable uns roundtrip tests with nas
#147
rcannood
opened
10 months ago
0
re-enable obs and var roundtrip tests with factor, factor_ordered and logical
#146
rcannood
opened
10 months ago
0
re-enable obs and var roundtrip tests with nas
#145
rcannood
opened
10 months ago
0
re-enable obsm and varm roundtrip tests
#144
rcannood
opened
10 months ago
0
re-enable obsp and varp roundtrip tests
#143
rcannood
opened
10 months ago
0
re-enable matrices with NAs tests in X and layers
#142
rcannood
closed
3 months ago
1
re-enable denseMatrix roundtrip tests in X and layers
#141
rcannood
opened
10 months ago
0
re-enable tests for writing compressed files
#140
rcannood
closed
10 months ago
1
re-enable test writing h5ad from SCE
#139
rcannood
closed
10 months ago
1
re-enable h5ad categorical tests
#138
rcannood
closed
10 months ago
1
Refactor tests and validation functions
#137
rcannood
closed
10 months ago
0
Move dummy data functions back to main package
#136
lazappi
closed
10 months ago
2
Pass all R CMD and BiocChecks
#135
bschilder
closed
10 months ago
4
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