`annotate_compounds` for combinations of drugs

scverse / pertpy

Perturbation Analysis in the scverse ecosystem.

https://pertpy.readthedocs.io/en/latest/

MIT License

92 stars 19 forks source link

Open MUCDK opened 2 months ago

MUCDK commented 2 months ago

As a lazy but regular user of pertpy, would be great to have.

Zethson commented 2 months ago

How are your combinations of drugs stored?

MUCDK commented 2 months ago

I think you can establish norms here. I just take the combosciplex dataset of pertpy. Here, we have two obs-columns Drug1 and Drug2