scverse scvi-tutorials issues

scverse / scvi-tutorials

Notebooks used in scvi-tools tutorials

https://docs.scvi-tools.org/en/stable/tutorials/index.html

BSD 3-Clause "New" or "Revised" License

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issues

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Drop Python 3.9

#317 ori-kron-wis closed 1 day ago
1
automated update for quick_start/api_overview.ipynb

#316 github-actions[bot] opened 1 week ago
2
[pre-commit.ci] pre-commit autoupdate

#315 pre-commit-ci[bot] opened 1 week ago
0
Changes scarches tutorial

#314 ori-kron-wis closed 2 weeks ago
2
Fix the progress bar during training models trough tout the tutorials

#313 ori-kron-wis closed 1 week ago
0
automated update for scrna/cellassign_tutorial.ipynb

#312 github-actions[bot] closed 2 weeks ago
2
automated update for quick_start/api_overview.ipynb

#311 github-actions[bot] closed 2 weeks ago
2
Update cellassign_tutorial.ipynb with numpy dummy

#310 ori-kron-wis closed 2 weeks ago
1
automated update for scrna/scVI_DE_worm.ipynb

#309 github-actions[bot] closed 2 weeks ago
1
[pre-commit.ci] pre-commit autoupdate

#308 pre-commit-ci[bot] closed 2 weeks ago
0
automated update for tuning/autotune_scvi.ipynb

#307 github-actions[bot] closed 2 weeks ago
1
automated update for tuning/autotune_new_model.ipynb

#306 github-actions[bot] closed 2 weeks ago
1
automated update for atac/PoissonVI.ipynb

#305 github-actions[bot] closed 2 weeks ago
1
automated update for atac/PeakVI.ipynb

#304 github-actions[bot] closed 2 weeks ago
1
cell assign tutorial update

#303 ori-kron-wis closed 3 weeks ago
1
added numpy to cellassign tutorial

#302 ori-kron-wis closed 4 weeks ago
1
[pre-commit.ci] pre-commit autoupdate

#301 pre-commit-ci[bot] closed 3 weeks ago
0
[pre-commit.ci] pre-commit autoupdate

#300 pre-commit-ci[bot] closed 2 months ago
0
revert previous commit

#299 martinkim0 closed 2 months ago
0
ci: add notebooks yaml

#298 martinkim0 closed 2 months ago
0
automated update for atac/PeakVI.ipynb

#297 github-actions[bot] closed 2 months ago
1
automated update for atac/PeakVI.ipynb

#296 github-actions[bot] closed 2 months ago
1
ci: refactor run notebook workflows

#295 martinkim0 closed 2 months ago
0
Update scArches tutorials to discuss encode_covariates

#294 martinkim0 closed 2 weeks ago
0
Add tutorial with custom Census dataloader

#293 martinkim0 opened 2 months ago
0
ci: fix release workflow

#292 martinkim0 closed 2 months ago
0
ci: add release workflow

#291 martinkim0 closed 2 months ago
1
[pre-commit.ci] pre-commit autoupdate

#290 pre-commit-ci[bot] closed 2 months ago
0
[pre-commit.ci] pre-commit autoupdate

#289 pre-commit-ci[bot] closed 2 months ago
0
feat: update dev module tutorial for lossoutput

#288 martinkim0 closed 2 months ago
1
misc: update license

#287 martinkim0 closed 2 months ago
0
[pre-commit.ci] pre-commit autoupdate

#286 pre-commit-ci[bot] closed 2 months ago
0
[pre-commit.ci] pre-commit autoupdate

#285 pre-commit-ci[bot] closed 3 months ago
0
[pre-commit.ci] pre-commit autoupdate

#284 pre-commit-ci[bot] closed 3 months ago
0
[pre-commit.ci] pre-commit autoupdate

#283 pre-commit-ci[bot] closed 3 months ago
0
[pre-commit.ci] pre-commit autoupdate

#282 pre-commit-ci[bot] closed 3 months ago
0
Quick Start Tutorial Code Error

#281 DrNamwob opened 3 months ago
1
[pre-commit.ci] pre-commit autoupdate

#280 pre-commit-ci[bot] closed 4 months ago
0
[pre-commit.ci] pre-commit autoupdate

#279 pre-commit-ci[bot] closed 4 months ago
0
MrVI Quick Start Tutorial

#278 justjhong closed 4 months ago
3
[pre-commit.ci] pre-commit autoupdate

#277 pre-commit-ci[bot] closed 4 months ago
0
[pre-commit.ci] pre-commit autoupdate

#276 pre-commit-ci[bot] closed 4 months ago
0
misc: manually update pre-commit versions

#275 martinkim0 closed 5 months ago
0
style: update pre-commit and run auto-fixes

#274 martinkim0 closed 5 months ago
1
Switch from using scrublet package to scanpy version

#273 martinkim0 opened 5 months ago
0
reference mapping

#272 Sirin24 closed 2 weeks ago
4
Changes to not use secret keys

#271 canergen closed 5 months ago
1
Add botocore unsigned key

#270 canergen closed 5 months ago
1
Updated census tutorial

#269 canergen closed 6 months ago
1
CELLxGENE model.

#268 canergen closed 6 months ago
2