scverse squidpy_notebooks issues

scverse / squidpy_notebooks

Tutorials for Squidpy

https://squidpy.readthedocs.io/en/stable/

MIT License

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issues

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nhood enrichment test

#37 ilibarra closed 3 years ago
0
Ex graph permutation tests

#36 ilibarra closed 3 years ago
0
add external tutorial on using DL features

#35 hspitzer closed 3 years ago
2
References in squidpy_notebooks

#34 hspitzer closed 3 years ago
2
Fixed tutorials

#33 michalk8 closed 3 years ago
8
List of tutorials that we need to add

#32 hspitzer closed 3 years ago
1
Pre-computed tutorials

#31 michalk8 closed 3 years ago
1
external tutorials and cleanup

#30 giovp closed 3 years ago
30
Ex graph permutation tests

#29 ilibarra closed 3 years ago
0
Additional/missing kwargs in sq.pl.nhood_enrichment

#28 ilibarra closed 3 years ago
1
Clean-up

#27 michalk8 closed 3 years ago
13
Pandoc filters

#26 michalk8 closed 3 years ago
0
Add ligrec example

#25 michalk8 closed 3 years ago
2
Fix CSS style + plot reset

#24 michalk8 closed 3 years ago
0
Fix .css styling for dataframes

#23 michalk8 closed 3 years ago
0
changes on existing image notebooks

#22 SabrinaRichter closed 3 years ago
2
Fix generated notebooks

#21 michalk8 closed 3 years ago
1
notes on image notebooks

#20 SabrinaRichter closed 3 years ago
1
add example for centrality scores

#19 AnnaChristina closed 3 years ago
0
Add generated files to .gitignore

#18 michalk8 closed 3 years ago
3
Update caching script

#17 michalk8 closed 3 years ago
2
creation of docs with py38 fails

#16 hspitzer closed 3 years ago
6
Add spellchecking, scanpy plotting reset

#15 michalk8 closed 3 years ago
4
Populate examples folder with examples!

#14 giovp closed 3 years ago
4
add interaction matrix example

#13 giovp closed 3 years ago
0
graph tutorials

#12 giovp closed 3 years ago
37
Make the pipeline more efficient

#11 michalk8 closed 3 years ago
2
Add token

#10 michalk8 closed 3 years ago
1
Image examples and tutorials

#9 hspitzer closed 3 years ago
26
Data caching

#8 michalk8 closed 3 years ago
21
Cache data

#7 michalk8 closed 3 years ago
1
Pre-commit modifies files but does not allow commit

#6 hspitzer closed 3 years ago
2
Invocation Error when calling `tox -e docs`

#5 hspitzer closed 3 years ago
4
Main

#4 michalk8 closed 3 years ago
1
Rename main back to master

#3 michalk8 closed 3 years ago
3
Add sphinx gallery

#2 michalk8 closed 3 years ago
1
Add config files

#1 michalk8 closed 3 years ago
0