Closed arnodelorme closed 3 years ago
Interesting. Here's what I get when I run the same command:
(base) [jamesmcd@login02 reverse-proxy]$ ./start-jupyter -p debug -d $HOME -A ddp363 -t 30 -s notebook
Your notebook is here:
https://animating-cried-skyward.expanse-user-content.sdsc.edu?token=3271e184fad1916f37cff1538042870a
If you encounter any issues, please email help@xsede.org and mention the Reverse Proxy Service.
Your job id is 1368573
You may occasionally run the command 'squeue -j 1368573' to check the status of your job
(base) [jamesmcd@login02 reverse-proxy]$ sq
JOBID PARTITION NAME USER ST TIME NODES NODELIST(REASON)
1368573 debug notebook jamesmcd R 0:02 1 exp-9-55
(base) [jamesmcd@login02 reverse-proxy]$ git status
On branch master
Your branch is up to date with 'origin/master'.
nothing to commit, working tree clean
Can you provide the output of squeue -u $USER ?
This specific job failed immediately.
[mkandes@login01 ~]$ sacct -j 1336982 --format=User,JobID,Jobname%60,partition,state,time,submit,start,end,elapsed,reqMem,allocgres,MaxVMSize,MaxRSS,nnodes,ncpus,reqGRES,nodelist%240qlssq
User JobID JobName Partition State Timelimit Submit Start End Elapsed ReqMem AllocGRES MaxVMSize MaxRSS NNodes NCPUS ReqGRES NodeList
--------- ------------ ----------------------------------------------------- ---------- ---------- ---------- ------------------- ------------------- ------------------- ---------- ---------- ------------ ---------- ---------- -------- ---------- ------------ -----------------------------------------------------
arno 1336982 notebook.sh debug FAILED 00:30:00 2021-02-19T13:55:58 2021-02-19T13:55:58 2021-02-19T13:56:00 00:00:02 1Gc 1 128 exp-9-55
1336982.bat+ batch FAILED 2021-02-19T13:55:58 2021-02-19T13:55:58 2021-02-19T13:56:00 00:00:02 1Gc 149688K 4440K 1 128 exp-9-55
[mkandes@login01 ~]$
@arnodelorme - Did you happen to receive a standard output and/or error file from Slurm here? If so, can you let me know where I can find it on Expanse?
I have tried again using the same commands and it works now. Maybe something was fixed?
This is using the head at #b17f03f from Feb 17th, 2021
ssh expanse.login.sdsc.edu git clone https://github.com/sdsc-hpc-training-org/reverse-proxy module load anaconda3 cd reverse-proxy ./start-jupyter -p debug -d $HOME -A csd403 -t 30 -s notebook
Issue 1: it selected compute even though I specified debug Issue 2: the job was not visible in the queue Issue 3: it was never reserved
[arno@login02 reverse-proxy]$ ./start-jupyter -p debug -d $HOME -A csd403 -t 30 -s notebook Your notebook is here: https://swoop-crested-easiness.expanse-user-content.sdsc.edu?token=0e3083190598d60faeb3bbd150f083f5 If you encounter any issues, please email help@xsede.org and mention the Reverse Proxy Service. Your job id is 1336982 You may occasionally run the command 'squeue -j 1336982' to check the status of your job [arno@login02 reverse-proxy]$ [arno@login02 reverse-proxy]$ squeue | grep arno [arno@login02 reverse-proxy]$ squeue | grep 1336982