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seqan
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raptor
A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.
https://docs.seqan.de/raptor
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[UTIL] Add hibf_sizes
#386
eseiler
closed
11 months ago
2
[INFRA] Update CI
#385
eseiler
closed
11 months ago
2
[FEATURE] Clang support
#384
eseiler
closed
11 months ago
2
[INFRA] Update submodules
#383
eseiler
closed
11 months ago
2
Reallow setting hash and fpr
#382
eseiler
opened
1 year ago
0
[INFRA] Update hibf
#381
eseiler
closed
1 year ago
2
[INFRA] Update hibf
#380
eseiler
closed
1 year ago
2
[MISC] Disallow setting fpr and hash when using layout file
#379
eseiler
closed
1 year ago
2
Bump actions/checkout from 3 to 4
#378
dependabot[bot]
closed
1 year ago
2
[INFRA] Sanitizer
#377
eseiler
closed
1 year ago
2
Sanitizer CI is failing
#376
eseiler
closed
1 year ago
0
[INFRA] Update hibf and chopper
#375
eseiler
closed
1 year ago
2
[INFRA] Bump minimum CMake
#374
eseiler
closed
1 year ago
2
[INFRA] Update chopper
#373
eseiler
closed
1 year ago
1
[MISC] Enable HIBF build timer
#372
eseiler
closed
1 year ago
2
[FIX] HIBF construction threads being ignored
#371
eseiler
closed
1 year ago
1
HIBF creates a very large index
#370
genomewalker
opened
1 year ago
3
[INFRA] Update seqan/std submodule
#369
eseiler
closed
1 year ago
2
[INFRA] Search for ccache earlier
#368
eseiler
closed
1 year ago
2
[INFRA] Update submodules
#367
eseiler
closed
1 year ago
2
[INFRA] Use HIBF lib
#366
eseiler
closed
1 year ago
2
[INFRA] Cleanup CMake messages
#365
eseiler
closed
1 year ago
2
[MISC] use the HIBF lib
#364
smehringer
closed
1 year ago
1
[INFRA] Accept any Google Test/Benchmark version
#363
eseiler
closed
1 year ago
2
[UTIL] Update ordering of values
#362
eseiler
closed
1 year ago
2
[INFRA] Update CI
#361
eseiler
closed
1 year ago
2
[INFRA] Improve caching
#360
eseiler
closed
1 year ago
2
[INFRA] Add CI for fortified flags
#359
eseiler
closed
1 year ago
2
[INFRA] Ensure that CXX and C compilers are same major version
#358
eseiler
closed
1 year ago
2
[FIX] Truncated file names in prepare
#357
eseiler
closed
1 year ago
3
String identifier for user bins
#356
pirovc
opened
1 year ago
1
Not properly parsing NCBI assembly filenames
#355
pirovc
closed
1 year ago
0
[DOC] Update License
#354
eseiler
closed
1 year ago
2
[INFRA] Update submodules
#353
eseiler
closed
1 year ago
2
[INFRA] Update CI
#352
eseiler
closed
1 year ago
2
[INFRA,FIX] Use SOURCE_DIR instead of URL
#351
eseiler
closed
1 year ago
2
example syntax for restrictions
#350
mr-c
opened
1 year ago
1
[INFRA] Fix macOS CMake install
#349
eseiler
closed
1 year ago
1
[UTIL] Update count_minimiser
#348
eseiler
closed
1 year ago
1
[INFRA] Detect LTO
#347
eseiler
closed
1 year ago
2
[FIX] Actually use all threads in raptor prepare
#346
eseiler
closed
1 year ago
1
[FIX] Use all threads in raptor prepare
#345
eseiler
closed
1 year ago
1
test lint action
#344
eseiler
closed
1 year ago
1
[INFRA] Use seqan/actions
#343
eseiler
closed
1 year ago
2
[INFRA] fix install target
#342
eseiler
closed
1 year ago
2
[DOC] remove brew badge
#341
eseiler
closed
1 year ago
1
[DOC] Remove brew instructions
#340
eseiler
closed
1 year ago
1
[DOC] Add new citation
#339
eseiler
closed
1 year ago
2
[DOC] typos
#338
eseiler
closed
1 year ago
1
[DOC] Use Doxygen Awesome
#337
eseiler
closed
1 year ago
2
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