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seqscope
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ficture
https://seqscope.github.io/ficture/
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LDA with Prior knowledge
#23
debienicolas
opened
2 days ago
0
Update run_together.py
#22
koetjen
opened
4 weeks ago
0
match coordinate in pixel.sorted.tsv with coordinate in tissue_position.parquet (visiumHD)
#21
seongju-cho
opened
1 month ago
1
Questions about post processing results
#20
jairaj-mathur
opened
1 month ago
1
OSError: [Errno 95] Operation not supported: (related to append csv in S3)
#19
jairaj-mathur
opened
1 month ago
0
TypeError: '<' not supported between instances of 'str' and 'float'
#18
jairaj-mathur
closed
1 month ago
4
ERROR:root:Cannot find bgzip. Please make sure that the path to --bgzip is correct
#17
jairaj-mathur
closed
1 month ago
1
Output details and the downstream analysis
#16
camelest
opened
2 months ago
2
Preprocess of Stereo-seq data
#15
camelest
closed
2 months ago
2
plot_pixel not show the entire tissue
#14
cherrie-g
closed
1 month ago
6
Black pixel-level factor image
#13
Nick-Eagles
closed
2 months ago
5
Unable to output full pixel image from MERSCOPE data
#12
stsai7
closed
2 months ago
3
Error in `ficture run_together` with Visium HD data
#11
Nick-Eagles
closed
2 months ago
4
Pixel level decoding & visualization error
#10
jamesboot
closed
4 months ago
4
Merging the new change from main
#9
hyunminkang
closed
5 months ago
0
no stereopy input in tutorial
#8
Yiikea
closed
4 months ago
1
transcript-level output
#7
ruqianl
opened
6 months ago
2
error when running example dataset
#6
lidanwu
closed
6 months ago
2
Prior knowledge and parameter tuning
#5
pakiessling
closed
4 months ago
1
tutorial for FICTURE plotting
#4
Bo-UT
closed
4 months ago
6
Downstream processing FICTURE output
#3
pakiessling
closed
7 months ago
2
License
#2
heylf
closed
7 months ago
1
Missing example file: filtered.matrix.tsv.gz
#1
huanlity
closed
8 months ago
1