seqscope / ficture

https://seqscope.github.io/ficture/
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FICTURE

FICTURE: Scalable segmentation-free analysis of sub-micron resolution spatial transcriptomics

Install

pip install ficture

Documentation https://seqscope.github.io/ficture/

Preprint (Real data results in the preprint are available on Zenodo)

For a brief introduction, see slides used for AGBT talk