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serratus-bio / open-virome

monorepo for data explorer UI and APIs
http://openvirome.com/
GNU Affero General Public License v3.0
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[Feature] Add Plot for Date Timeline in Map module #60

Open lukepereira opened 1 month ago

lukepereira commented 1 month ago

This can be a bar plot that aggregates on {month}-{year} buckets. Decide on using collection date or release date based on what data exists in our table

ababaian commented 1 month ago

Based on feedback:

Shoichi Sakaguchi It would be great to explore viruses based on their sequencing date and see how the virus of interest spread

ababaian commented 1 week ago

The Easiest implementation of this is simply to plot the Release Date for each of the runs in SraMetaData like was done in palmID:

image

ababaian commented 1 week ago

I've moved this to the map module, I think it belongs a little better there especially if we can transition it to the collection date meta-data.

ababaian commented 3 days ago

From #103 @almosnow

Parse date and time information from BioSample attributes (akin to what we already do with locations).

I propose doing a quick pass and extract the most trivial values (like explicit dates, years, ...) in order to have enough data to start working out the UX of the map and other modules related to temporal information.

This can/should be a task related to the Timeline [Feature]