Currently when you click on a virus node or run node, the same format of table is shown, only the rows displayed are filtered differently.
Click Virus
Click Run
The table columns are listed below. They are highly redundant for certain node types, so they should be adjusted to display different sets of columns per type:
run
scientific_name
bio_sample
bio_project
palm_id
sotu
nickname
gb_acc
gb_pid
gb_eval
tax_species
tax_family
node
node_coverage
node_pid
node_eval
node_qc
node_seq
Virus Node Columns
Display runs-edges
run
scientific_name
bio_sample
bio_project
palm_id
node_coverage
node_pid
node_eval
node_seq
Run Node Columns
Display virus-edges
palm_id
sotu
nickname
node_coverage
gb_acc
gb_pid
gb_eval
tax_species
tax_family
node
node_pid
node_eval
node_seq
Edge Columns
For edges, they each represent a single contig (ambiguously called a node by assembly software). The view here should display a fasta format file of the form:
Currently when you click on a
virus
node orrun
node, the same format of table is shown, only the rows displayed are filtered differently.Click Virus
Click Run
The table columns are listed below. They are highly redundant for certain node types, so they should be adjusted to display different sets of columns per type:
run
scientific_name
bio_sample
bio_project
palm_id
sotu
nickname
gb_acc
gb_pid
gb_eval
tax_species
tax_family
node
node_coverage
node_pid
node_eval
node_qc
node_seq
Virus Node Columns
Display runs-edges
run
scientific_name
bio_sample
bio_project
palm_id
node_coverage
node_pid
node_eval
node_seq
Run Node Columns
Display virus-edges
palm_id
sotu
nickname
node_coverage
gb_acc
gb_pid
gb_eval
tax_species
tax_family
node
node_pid
node_eval
node_seq
Edge Columns
For edges, they each represent a single contig (ambiguously called a
node
by assembly software). The view here should display afasta
format file of the form:for example