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sgoldenlab
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simba
SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers
https://simba-uw-tf-dev.readthedocs.io/
GNU General Public License v3.0
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Bump pillow from 5.4.1 to 10.0.1 in /docs
#314
dependabot[bot]
closed
5 months ago
1
Bump pyarrow from 6.0.1 to 14.0.1 in /docs
#313
dependabot[bot]
opened
6 months ago
0
Bump pyarrow from 6.0.1 to 14.0.1
#312
dependabot[bot]
opened
6 months ago
0
Bump urllib3 from 1.26.6 to 1.26.18 in /docs
#311
dependabot[bot]
opened
6 months ago
0
Bump pyarrow from 6.0.1 to 14.0.1 in /simba
#310
dependabot[bot]
opened
6 months ago
0
Path plots
#309
IsabelleSajonia
closed
7 months ago
4
Total distance traveled and velocity
#307
IsabelleSajonia
closed
7 months ago
6
Error when correcting outliers
#306
IsabelleSajonia
opened
8 months ago
2
Visualising ROI not working
#305
neurorie
opened
8 months ago
3
Outlier correction - movement
#303
linab8
opened
8 months ago
23
I can't extract frames
#302
linab8
closed
8 months ago
2
this is a long commit
#301
tzukpolinsky
closed
8 months ago
0
Stopped while assigning IDs to two animals
#300
linab8
closed
8 months ago
6
Distance visualisation
#299
DorianBattivelli
opened
8 months ago
34
Validate Model on Single Video selection is bugged in current version
#298
rfkova
closed
8 months ago
70
SIMBA VIDEO PARAMETERS FILE ERROR
#297
Chantal-Wi
opened
8 months ago
1
ROI analysis video quality
#296
neurorie
opened
8 months ago
10
Analysing wrong bodypart
#295
FarahnazYF
opened
8 months ago
6
File in Outlier_Movement__Location Folder Not Found for Analysis
#294
nschapp
opened
8 months ago
24
Include Timestamp for Each Behavioral Bout
#293
mrnels19
opened
8 months ago
4
superimpose frame count on video
#292
filos93
closed
8 months ago
10
info on linked events regarding multiple animals occurring in ROI
#291
filos93
closed
8 months ago
11
no ROI_features_summary csv file created
#290
filos93
closed
9 months ago
3
Documents in model_evaluations Folder
#289
mrnels19
opened
9 months ago
1
changes for python 3.9 and python 3.10
#288
tzukpolinsky
closed
8 months ago
15
Analyse cleaning behavior in coral reef
#287
DanieleRomeo
opened
9 months ago
24
Missing one animal tracking
#286
DorianBattivelli
opened
9 months ago
8
Successful but then empty CSV upon analysing ROI data
#285
neurorie
closed
9 months ago
9
Issues importing sleap data
#284
IsabelleSajonia
opened
10 months ago
36
Question about body parts
#283
lxspedeza
opened
10 months ago
1
Inaccurate FPS extracted from video in Batch Process videos
#282
florianduclot
opened
10 months ago
9
Customize outlier correction
#281
DorianBattivelli
opened
10 months ago
10
"Create path plot" tool not working
#280
alisabak
closed
10 months ago
2
ROIs H5 file convertion
#279
DorianBattivelli
closed
10 months ago
5
Unsupervised Learning Missing In Anaconda Installation
#278
nsusic
opened
11 months ago
5
Mice switching IDs every few frames
#277
ZelikowskyLab
opened
11 months ago
13
SIMBA FEATURE NUMBER MISMATCH ERROR
#276
13281306705
closed
10 months ago
4
SIMBA COMPLETE: ROI definitions saved for video: {self.file_name} 🚀
#275
Gfernandezv
closed
10 months ago
6
I have two models and I need to combine them.... also... leads on CLI implementation?
#274
rfkova
closed
11 months ago
59
Error message while trying to train a classifier refer to the memory
#273
briki1234
closed
11 months ago
17
issue with 1 fps video processing
#272
DorianBattivelli
closed
10 months ago
2
I faile to install SimBA on MacOS Ventura 13.4.1
#271
DorianBattivelli
opened
1 year ago
29
Do non-classified frames affects the training model?
#270
BarakMalul
opened
1 year ago
9
Impossible_to_draw_ROI
#269
DorianBattivelli
opened
1 year ago
2
Existing Annotations Do Not Appear in GUI After Pseudo-Labeling or When Continuing Existing Annotations
#268
nsusic
opened
1 year ago
12
Problem in training the model
#267
BarakMalul
closed
1 year ago
14
"Visualise pose-estimation" tool not working
#266
alisabak
closed
1 year ago
5
Behavioral Classifier for Flies: How to Label Data
#265
sahilsingh2402
opened
1 year ago
4
Files are not created.
#264
BarakMalul
closed
1 year ago
14
Cannot install on Apple Silicon M1
#263
bdy2530
closed
10 months ago
16
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