shenorrLabTRDF bseqsc issues

shenorrLabTRDF / bseqsc

Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline

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update NMF from CRAN

#19 LorenzoMerotto closed 1 year ago
0
page not found

#18 abulislam opened 1 year ago
0
Error in out[[t]]$coefs

#17 Li-Rui091 opened 2 years ago
0
Release Version

#16 PelzKo closed 3 years ago
1
CIBERSORTx

#15 wibll opened 3 years ago
0
How to normalize and calculate the gene expression of bulk RNA seq and scRNA seq？

#14 byb-paper opened 4 years ago
0
Error Running CIBERSORT to estimate proportion

#13 soleilll opened 4 years ago
1
DEseq with bseqsc package

#12 nfancy opened 5 years ago
0
Model is empty!

#11 Kai6662 opened 5 years ago
3
Error in array(NA_real_, dim = c(nrow(b), ncol(cc), length(lev)), dimnames = c(rownames(b), : length of 'dimnames' [1686] must match that of 'dims' [3]

#10 charlesgwellem opened 5 years ago
2
Error in dimnames(covmat.unscaled) <- list(xnames, xnames) : length of 'dimnames' [1] not equal to array extent

#9 charlesgwellem opened 5 years ago
0
Error in mutate(edger_pvals, Regulated = Adjusted <= 0.01 & Adjusted <= : could not find function "mutate"

#8 deo999 opened 5 years ago
2
Can't find processed datasets

#7 muntahafsamad opened 5 years ago
1
pre-processing of scRNA-seq and bulk RNA-seq

#6 InesdeSantiago opened 6 years ago
0
Error estimating proportions

#5 ONeillMB1 closed 6 years ago
1
request CIBERSORT.R for BSeq-sc installation

#4 xndless opened 6 years ago
0
the number of coefficients (proportions of cell types) in extended model

#3 gurkanbal opened 7 years ago
4
ERROR 404 on data files for the tutorial

#2 jperales closed 7 years ago
0
Get access to the bseq-sc code

#1 jperales opened 7 years ago
8