fish_social_network

Exploring changes in fish co-occurence patterns along environmental gradients using MRFcov model, by nicholasjclark. Data is described in medata.

WORK IN PROGRESS

Review this study via the following workflow

1. Packages required
2. Objects and data loaded from here. Functions loaded via the functions script; More information on data processing in the Data processing script.
3. optional: Data distribution and exploration in Data Overview or in the HTML
4. Run models and explore relative importance of covariates (RI) with this script. Only the nonspatial Poisson model (grps_pois and dip_pois) is relevant for my thesis results.
5. Predict and visualise species pairs abundances - predictions + raw data

Extra: Species Maps

Results for viewing (not final)