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shyamvis / ACT-COVID-Ontology

ACT COVID Ontology
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Lab test values harmonized terms #39

Closed shyamvis closed 4 years ago

shyamvis commented 4 years ago

Based on ACT meeting on 5/26/2020 we want to separate the nuclei acids and the antibodies test values.

Rename harmonized values for nucleic acid test as follows: ANY Equivocal Lab Test -> ANY Equivocal Lab Test (Nucleic Acids) ANY Negative Lab Test -> ANY Negative Lab Test (Nucleic Acids) ANY Pending Lab Test -> ANY Pending Lab Test (Nucleic Acids) ANY Positive Lab Test -> ANY Positive Lab Test (Nucleic Acids)

Create new harmonized values for antibody tests as follows: ANY Equivocal Lab Test (Antibodies) ANY Negative Lab Test (Antibodies) ANY Pending Lab Test (Antibodies) ANY Positive Lab Test (Antibodies)

Minor name changes: SARS-CoV-2 nucleic acids (Respiratory specimen) -> SARS-CoV-2 Nucleic Acids (Respiratory specimen) [capitalize nucleic acids]
SARS-CoV-2 nucleic acids (Unspecified specimen) -> SARS-CoV-2 Nucleic Acids (Unspecified specimen) [capitalize nucleic acids]

mim18 commented 4 years ago

all nucleic acid tests are Equivocal?

shyamvis commented 4 years ago

Fixed.

shyamvis commented 4 years ago

LOINC value sets:

Nucleic Acids (oral fluids): Positive, Negative, Equivocal https://loinc.org/LL2009-0/ Nucleic Acids (serum or plasma): Detected, Not detected, Equivocal, Inconclusive https://loinc.org/LL956-4/