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signaturescience / fiphde

Forecasting Influenza in Support of Public Health Decision Making
https://signaturescience.github.io/fiphde/
GNU General Public License v3.0
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fiphde

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fiphde: Forecasting Influenza in Support of Public Health DEcision Making

Motivation

fiphde was originally created to operationally forecast influenza hospitalizations during the 2021-22 and 2022-23 seasons of the FluSight challenge. The package includes functions for data retrieval, modeling, near-term forecasting, and forecast summarization. Functionality from fiphde has been implemented for other infectious disease forecasting, including the 2022-23 DoD COVID-like illness forecasting challenge.

Installation

To install fiphde from GitHub:

# install.packages("remotes")
remotes::install_github("signaturescience/fiphde", build_vignettes = TRUE)

Usage

To get started, see the package vignette:

vignette("basic_usage", package="fiphde")