sing-group bicycle issues

sing-group / bicycle

bicycle (bisulfite-based methylcytosine caller) is a next-generation sequencing bioinformatics pipeline able to perform a full DNA methylation level analysis

http://www.sing-group.org/bicycle

GNU Lesser General Public License v3.0

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issues

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Help for a newbie with some samples

#11 elOscatron opened 2 years ago
1
SEVERE: Error during execution - analyze-differential-methylation

#10 abedkurdi closed 3 years ago
14
Bump junit from 4.12 to 4.13.1

#9 dependabot[bot] opened 3 years ago
0
Differential methylation for each annotated region (Bed file) header interpretation

#8 freedomq8 opened 3 years ago
1
Bicycle Permissions error

#7 SriAnushaMatta opened 4 years ago
9
q-value doesnt change across methylated regions

#6 freedomq8 closed 4 years ago
5
Commonly methylated

#5 freedomq8 opened 4 years ago
8
Annotation and bed file for hg19

#4 freedomq8 closed 4 years ago
2
align with mutli thread issue

#3 freedomq8 closed 4 years ago
17
bicycle align does not work with gzipped fastq files

#2 cschu opened 6 years ago
1
reference-bisulfitation requires reference fasta to have .fa ending

#1 cschu closed 6 years ago
2